Index

_

__init__() (mattertune.backbones.m3gnet.model.MatGLBatch method) (mattertune.backbones.m3gnet.model.MatGLData method) (mattertune.data.datamodule.MatterTuneDataModule method) (mattertune.data.db.DBDataset method) (mattertune.data.json_data.JSONDataset method) (mattertune.data.matbench.MatbenchDataset method) (mattertune.data.mp.MPDataset method) (mattertune.data.mptraj.MPTrajDataset method) (mattertune.data.omat24.OMAT24Dataset method) (mattertune.data.xyz.XYZDataset method) (mattertune.finetune.base.FinetuneModuleBase method) (mattertune.finetune.data_util.IterableDatasetWrapper method) (mattertune.finetune.data_util.MapDatasetWrapper method) (mattertune.finetune.metrics.FinetuneMetrics method) (mattertune.finetune.metrics.MetricBase method) (mattertune.finetune.metrics.PropertyMetrics method) (mattertune.main.MatterTuner method) (mattertune.normalization.ComposeNormalizers method) (mattertune.normalization.MeanStdNormalizerModule method) (mattertune.normalization.NormalizationContext method) (mattertune.normalization.NormalizerModule method) (mattertune.normalization.PerAtomReferencingNormalizerModule method) (mattertune.normalization.RMSNormalizerModule method) (mattertune.wrappers.ase_calculator.MatterTuneCalculator method) (mattertune.wrappers.property_predictor.MatterTunePropertyPredictor method)

A

accelerator (mattertune.configs.main.TrainerConfig attribute) (mattertune.configs.TrainerConfig attribute) (mattertune.main.TrainerConfig attribute) AdamConfig (class in mattertune.configs) (class in mattertune.configs.finetune) (class in mattertune.configs.finetune.optimizer) (class in mattertune.finetune.optimizer) AdamWConfig (class in mattertune.configs) (class in mattertune.configs.finetune) (class in mattertune.configs.finetune.optimizer) (class in mattertune.finetune.optimizer) additional_init_parameters (mattertune.configs.loggers.WandbLoggerConfig attribute) (mattertune.configs.WandbLoggerConfig attribute) (mattertune.loggers.WandbLoggerConfig attribute) additional_params (mattertune.configs.loggers.TensorBoardLoggerConfig attribute) (mattertune.configs.TensorBoardLoggerConfig attribute) (mattertune.loggers.TensorBoardLoggerConfig attribute) additional_trainer_kwargs (mattertune.configs.main.TrainerConfig attribute) (mattertune.configs.TrainerConfig attribute) (mattertune.main.TrainerConfig attribute) aeaint (mattertune.backbones.jmp.model.CutoffsConfig attribute) (mattertune.backbones.jmp.model.MaxNeighborsConfig attribute) (mattertune.configs.backbones.CutoffsConfig attribute) (mattertune.configs.backbones.jmp.CutoffsConfig attribute) (mattertune.configs.backbones.jmp.MaxNeighborsConfig attribute) (mattertune.configs.backbones.jmp.model.CutoffsConfig attribute) (mattertune.configs.backbones.jmp.model.MaxNeighborsConfig attribute) (mattertune.configs.backbones.MaxNeighborsConfig attribute) (mattertune.configs.CutoffsConfig attribute) (mattertune.configs.MaxNeighborsConfig attribute) aint (mattertune.backbones.jmp.model.CutoffsConfig attribute) (mattertune.backbones.jmp.model.MaxNeighborsConfig attribute) (mattertune.configs.backbones.CutoffsConfig attribute) (mattertune.configs.backbones.jmp.CutoffsConfig attribute) (mattertune.configs.backbones.jmp.MaxNeighborsConfig attribute) (mattertune.configs.backbones.jmp.model.CutoffsConfig attribute) (mattertune.configs.backbones.jmp.model.MaxNeighborsConfig attribute) (mattertune.configs.backbones.MaxNeighborsConfig attribute) (mattertune.configs.CutoffsConfig attribute) (mattertune.configs.MaxNeighborsConfig attribute) allow_zero_length_dataloader_with_multiple_devices (mattertune.data.datamodule.MatterTuneDataModule attribute) amsgrad (mattertune.configs.AdamConfig attribute) (mattertune.configs.AdamWConfig attribute) (mattertune.configs.finetune.AdamConfig attribute) (mattertune.configs.finetune.AdamWConfig attribute) (mattertune.configs.finetune.optimizer.AdamConfig attribute) (mattertune.configs.finetune.optimizer.AdamWConfig attribute) (mattertune.finetune.optimizer.AdamConfig attribute) (mattertune.finetune.optimizer.AdamWConfig attribute)

anonymous (mattertune.configs.loggers.WandbLoggerConfig attribute) (mattertune.configs.WandbLoggerConfig attribute) (mattertune.loggers.WandbLoggerConfig attribute) api (mattertune.configs.data.mp.MPDatasetConfig attribute) (mattertune.configs.data.MPDatasetConfig attribute) (mattertune.configs.MPDatasetConfig attribute) (mattertune.data.mp.MPDatasetConfig attribute) ase_calculator() (mattertune.finetune.base.FinetuneModuleBase method) ase_calculator_property_name() (mattertune.configs.EnergyPropertyConfig method) (mattertune.configs.finetune.EnergyPropertyConfig method) (mattertune.configs.finetune.ForcesPropertyConfig method) (mattertune.configs.finetune.GraphPropertyConfig method) (mattertune.configs.finetune.properties.EnergyPropertyConfig method) (mattertune.configs.finetune.properties.ForcesPropertyConfig method) (mattertune.configs.finetune.properties.GraphPropertyConfig method) (mattertune.configs.finetune.properties.PropertyConfigBase method) (mattertune.configs.finetune.properties.StressesPropertyConfig method) (mattertune.configs.finetune.PropertyConfigBase method) (mattertune.configs.finetune.StressesPropertyConfig method) (mattertune.configs.ForcesPropertyConfig method) (mattertune.configs.GraphPropertyConfig method) (mattertune.configs.PropertyConfigBase method) (mattertune.configs.StressesPropertyConfig method) (mattertune.finetune.properties.EnergyPropertyConfig method) (mattertune.finetune.properties.ForcesPropertyConfig method) (mattertune.finetune.properties.GraphPropertyConfig method) (mattertune.finetune.properties.PropertyConfigBase method) (mattertune.finetune.properties.StressesPropertyConfig method) atoms_to_data() (mattertune.backbones.eqV2.model.EqV2BackboneModule method) (mattertune.backbones.jmp.model.JMPBackboneModule method) (mattertune.backbones.m3gnet.model.M3GNetBackboneModule method) (mattertune.backbones.orb.model.ORBBackboneModule method) (mattertune.finetune.base.FinetuneModuleBase method) atoms_to_graph (mattertune.backbones.eqV2.model.EqV2BackboneConfig attribute) (mattertune.configs.backbones.eqV2.EqV2BackboneConfig attribute) (mattertune.configs.backbones.eqV2.model.EqV2BackboneConfig attribute) (mattertune.configs.backbones.EqV2BackboneConfig attribute) (mattertune.configs.EqV2BackboneConfig attribute) auto_insert_metric_name (mattertune.callbacks.model_checkpoint.ModelCheckpointConfig attribute) (mattertune.configs.callbacks.model_checkpoint.ModelCheckpointConfig attribute) (mattertune.configs.callbacks.ModelCheckpointConfig attribute) (mattertune.configs.main.ModelCheckpointConfig attribute) (mattertune.configs.ModelCheckpointConfig attribute) AutoSplitDataModuleConfig (class in mattertune.configs) (class in mattertune.configs.data) (class in mattertune.configs.data.datamodule) (class in mattertune.data.datamodule)

B

backbone_output (mattertune.finetune.base.ModelOutput attribute) backbone_registry (in module mattertune.registry) batch_sampler (mattertune.finetune.loader.DataLoaderKwargs attribute) batch_size (mattertune.configs.data.AutoSplitDataModuleConfig attribute) (mattertune.configs.data.datamodule.AutoSplitDataModuleConfig attribute) (mattertune.configs.data.datamodule.DataModuleBaseConfig attribute) (mattertune.configs.data.datamodule.ManualSplitDataModuleConfig attribute) (mattertune.configs.data.DataModuleBaseConfig attribute) (mattertune.configs.data.ManualSplitDataModuleConfig attribute) (mattertune.configs.DataModuleBaseConfig attribute) (mattertune.data.datamodule.AutoSplitDataModuleConfig attribute) (mattertune.data.datamodule.DataModuleBaseConfig attribute) (mattertune.data.datamodule.ManualSplitDataModuleConfig attribute) (mattertune.finetune.loader.DataLoaderKwargs attribute)

batch_to_labels() (mattertune.backbones.eqV2.model.EqV2BackboneModule method) (mattertune.backbones.jmp.model.JMPBackboneModule method) (mattertune.backbones.m3gnet.model.M3GNetBackboneModule method) (mattertune.backbones.orb.model.ORBBackboneModule method) (mattertune.finetune.base.FinetuneModuleBase method) betas (mattertune.configs.AdamConfig attribute) (mattertune.configs.AdamWConfig attribute) (mattertune.configs.finetune.AdamConfig attribute) (mattertune.configs.finetune.AdamWConfig attribute) (mattertune.configs.finetune.optimizer.AdamConfig attribute) (mattertune.configs.finetune.optimizer.AdamWConfig attribute) (mattertune.finetune.optimizer.AdamConfig attribute) (mattertune.finetune.optimizer.AdamWConfig attribute)

C

calculate() (mattertune.wrappers.ase_calculator.MatterTuneCalculator method) check_finite (mattertune.callbacks.early_stopping.EarlyStoppingConfig attribute) (mattertune.configs.callbacks.early_stopping.EarlyStoppingConfig attribute) (mattertune.configs.callbacks.EarlyStoppingConfig attribute) (mattertune.configs.EarlyStoppingConfig attribute) (mattertune.configs.main.EarlyStoppingConfig attribute) check_on_train_epoch_end (mattertune.callbacks.early_stopping.EarlyStoppingConfig attribute) (mattertune.configs.callbacks.early_stopping.EarlyStoppingConfig attribute) (mattertune.configs.callbacks.EarlyStoppingConfig attribute) (mattertune.configs.EarlyStoppingConfig attribute) (mattertune.configs.main.EarlyStoppingConfig attribute) check_val_every_n_epoch (mattertune.configs.main.TrainerConfig attribute) (mattertune.configs.TrainerConfig attribute) (mattertune.main.TrainerConfig attribute) checkpoint (mattertune.configs.main.TrainerConfig attribute) (mattertune.configs.TrainerConfig attribute) (mattertune.main.TrainerConfig attribute) checkpoint_name (mattertune.configs.loggers.WandbLoggerConfig attribute) (mattertune.configs.WandbLoggerConfig attribute) (mattertune.loggers.WandbLoggerConfig attribute) checkpoint_path (mattertune.backbones.eqV2.model.EqV2BackboneConfig attribute) (mattertune.configs.backbones.eqV2.EqV2BackboneConfig attribute) (mattertune.configs.backbones.eqV2.model.EqV2BackboneConfig attribute) (mattertune.configs.backbones.EqV2BackboneConfig attribute) (mattertune.configs.EqV2BackboneConfig attribute) ckpt_path (mattertune.backbones.jmp.model.JMPBackboneConfig attribute) (mattertune.backbones.m3gnet.model.M3GNetBackboneConfig attribute) (mattertune.configs.backbones.jmp.JMPBackboneConfig attribute) (mattertune.configs.backbones.jmp.model.JMPBackboneConfig attribute) (mattertune.configs.backbones.JMPBackboneConfig attribute) (mattertune.configs.backbones.m3gnet.M3GNetBackboneConfig attribute) (mattertune.configs.backbones.m3gnet.model.M3GNetBackboneConfig attribute) (mattertune.configs.backbones.M3GNetBackboneConfig attribute) (mattertune.configs.JMPBackboneConfig attribute) (mattertune.configs.M3GNetBackboneConfig attribute) collate_fn() (mattertune.backbones.eqV2.model.EqV2BackboneModule method) (mattertune.backbones.jmp.model.JMPBackboneModule method) (mattertune.backbones.m3gnet.model.M3GNetBackboneModule method) (mattertune.backbones.orb.model.ORBBackboneModule method) (mattertune.finetune.base.FinetuneModuleBase method) ComposeNormalizers (class in mattertune.normalization) compositions (mattertune.normalization.NormalizationContext attribute) compute_loss() (in module mattertune.finetune.loss) compute_per_atom_references() (in module mattertune.normalization) compute_per_atom_references_cli_main() (in module mattertune.normalization) configure_optimizers() (mattertune.finetune.base.FinetuneModuleBase method) conservative (mattertune.configs.finetune.ForcesPropertyConfig attribute) (mattertune.configs.finetune.properties.ForcesPropertyConfig attribute) (mattertune.configs.finetune.properties.StressesPropertyConfig attribute) (mattertune.configs.finetune.StressesPropertyConfig attribute) (mattertune.configs.ForcesPropertyConfig attribute) (mattertune.configs.StressesPropertyConfig attribute) (mattertune.finetune.properties.ForcesPropertyConfig attribute) (mattertune.finetune.properties.StressesPropertyConfig attribute) cooldown (mattertune.configs.finetune.lr_scheduler.ReduceOnPlateauConfig attribute) (mattertune.configs.finetune.ReduceOnPlateauConfig attribute) (mattertune.configs.ReduceOnPlateauConfig attribute) (mattertune.finetune.lr_scheduler.ReduceOnPlateauConfig attribute) CosineAnnealingLRConfig (class in mattertune.configs) (class in mattertune.configs.finetune) (class in mattertune.configs.finetune.lr_scheduler) (class in mattertune.finetune.lr_scheduler) cpu_data_transform() (mattertune.backbones.eqV2.model.EqV2BackboneModule method) (mattertune.backbones.jmp.model.JMPBackboneModule method) (mattertune.backbones.m3gnet.model.M3GNetBackboneModule method) (mattertune.backbones.orb.model.ORBBackboneModule method) (mattertune.finetune.base.FinetuneModuleBase method) create_callback() (mattertune.callbacks.early_stopping.EarlyStoppingConfig method) (mattertune.callbacks.model_checkpoint.ModelCheckpointConfig method) (mattertune.configs.callbacks.early_stopping.EarlyStoppingConfig method) (mattertune.configs.callbacks.EarlyStoppingConfig method) (mattertune.configs.callbacks.model_checkpoint.ModelCheckpointConfig method) (mattertune.configs.callbacks.ModelCheckpointConfig method) (mattertune.configs.EarlyStoppingConfig method) (mattertune.configs.main.EarlyStoppingConfig method) (mattertune.configs.main.ModelCheckpointConfig method) (mattertune.configs.ModelCheckpointConfig method) create_dataloader() (in module mattertune.finetune.loader) (mattertune.finetune.base.FinetuneModuleBase method) create_dataset() (mattertune.configs.data.base.DatasetConfigBase method) (mattertune.configs.data.DatasetConfigBase method) (mattertune.configs.data.db.DatasetConfigBase method) (mattertune.configs.data.db.DBDatasetConfig method) (mattertune.configs.data.DBDatasetConfig method) (mattertune.configs.data.json_data.DatasetConfigBase method) (mattertune.configs.data.json_data.JSONDatasetConfig method) (mattertune.configs.data.JSONDatasetConfig method) (mattertune.configs.data.matbench.DatasetConfigBase method) (mattertune.configs.data.matbench.MatbenchDatasetConfig method) (mattertune.configs.data.MatbenchDatasetConfig method) (mattertune.configs.data.mp.DatasetConfigBase method) (mattertune.configs.data.mp.MPDatasetConfig method) (mattertune.configs.data.MPDatasetConfig method) (mattertune.configs.data.mptraj.DatasetConfigBase method) (mattertune.configs.data.mptraj.MPTrajDatasetConfig method) (mattertune.configs.data.MPTrajDatasetConfig method) (mattertune.configs.data.omat24.DatasetConfigBase method) (mattertune.configs.data.omat24.OMAT24DatasetConfig method) (mattertune.configs.data.OMAT24DatasetConfig method) (mattertune.configs.data.xyz.DatasetConfigBase method) (mattertune.configs.data.xyz.XYZDatasetConfig method) (mattertune.configs.data.XYZDatasetConfig method) (mattertune.configs.DatasetConfigBase method) (mattertune.configs.DBDatasetConfig method) (mattertune.configs.JSONDatasetConfig method) (mattertune.configs.MatbenchDatasetConfig method) (mattertune.configs.MPDatasetConfig method) (mattertune.configs.MPTrajDatasetConfig method) (mattertune.configs.OMAT24DatasetConfig method) (mattertune.configs.XYZDatasetConfig method) (mattertune.data.base.DatasetConfigBase method) (mattertune.data.db.DBDatasetConfig method) (mattertune.data.json_data.JSONDatasetConfig method) (mattertune.data.matbench.MatbenchDatasetConfig method) (mattertune.data.mp.MPDatasetConfig method) (mattertune.data.mptraj.MPTrajDatasetConfig method) (mattertune.data.omat24.OMAT24DatasetConfig method) (mattertune.data.xyz.XYZDatasetConfig method)

create_datasets() (mattertune.configs.AutoSplitDataModuleConfig method) (mattertune.configs.data.AutoSplitDataModuleConfig method) (mattertune.configs.data.datamodule.AutoSplitDataModuleConfig method) (mattertune.configs.data.datamodule.DataModuleBaseConfig method) (mattertune.configs.data.datamodule.ManualSplitDataModuleConfig method) (mattertune.configs.data.DataModuleBaseConfig method) (mattertune.configs.data.ManualSplitDataModuleConfig method) (mattertune.configs.DataModuleBaseConfig method) (mattertune.configs.ManualSplitDataModuleConfig method) (mattertune.data.datamodule.AutoSplitDataModuleConfig method) (mattertune.data.datamodule.DataModuleBaseConfig method) (mattertune.data.datamodule.ManualSplitDataModuleConfig method) create_logger() (mattertune.configs.CSVLoggerConfig method) (mattertune.configs.loggers.CSVLoggerConfig method) (mattertune.configs.loggers.TensorBoardLoggerConfig method) (mattertune.configs.loggers.WandbLoggerConfig method) (mattertune.configs.main.CSVLoggerConfig method) (mattertune.configs.TensorBoardLoggerConfig method) (mattertune.configs.WandbLoggerConfig method) (mattertune.loggers.CSVLoggerConfig method) (mattertune.loggers.TensorBoardLoggerConfig method) (mattertune.loggers.WandbLoggerConfig method) create_lr_scheduler() (in module mattertune.finetune.lr_scheduler) create_metrics() (mattertune.finetune.base.FinetuneModuleBase method) create_model() (mattertune.backbones.eqV2.model.EqV2BackboneConfig method) (mattertune.backbones.eqV2.model.EqV2BackboneModule method) (mattertune.backbones.jmp.model.JMPBackboneConfig method) (mattertune.backbones.jmp.model.JMPBackboneModule method) (mattertune.backbones.m3gnet.model.M3GNetBackboneConfig method) (mattertune.backbones.m3gnet.model.M3GNetBackboneModule method) (mattertune.backbones.orb.model.ORBBackboneConfig method) (mattertune.backbones.orb.model.ORBBackboneModule method) (mattertune.configs.backbones.eqV2.EqV2BackboneConfig method) (mattertune.configs.backbones.eqV2.FinetuneModuleBaseConfig method) (mattertune.configs.backbones.eqV2.model.EqV2BackboneConfig method) (mattertune.configs.backbones.eqV2.model.FinetuneModuleBaseConfig method) (mattertune.configs.backbones.EqV2BackboneConfig method) (mattertune.configs.backbones.FinetuneModuleBaseConfig method) (mattertune.configs.backbones.jmp.FinetuneModuleBaseConfig method) (mattertune.configs.backbones.jmp.JMPBackboneConfig method) (mattertune.configs.backbones.jmp.model.FinetuneModuleBaseConfig method) (mattertune.configs.backbones.jmp.model.JMPBackboneConfig method) (mattertune.configs.backbones.JMPBackboneConfig method) (mattertune.configs.backbones.m3gnet.FinetuneModuleBaseConfig method) (mattertune.configs.backbones.m3gnet.M3GNetBackboneConfig method) (mattertune.configs.backbones.m3gnet.model.FinetuneModuleBaseConfig method) (mattertune.configs.backbones.m3gnet.model.M3GNetBackboneConfig method) (mattertune.configs.backbones.M3GNetBackboneConfig method) (mattertune.configs.backbones.orb.FinetuneModuleBaseConfig method) (mattertune.configs.backbones.orb.model.FinetuneModuleBaseConfig method) (mattertune.configs.backbones.orb.model.ORBBackboneConfig method) (mattertune.configs.backbones.orb.ORBBackboneConfig method) (mattertune.configs.backbones.ORBBackboneConfig method) (mattertune.configs.EqV2BackboneConfig method) (mattertune.configs.finetune.base.FinetuneModuleBaseConfig method) (mattertune.configs.finetune.FinetuneModuleBaseConfig method) (mattertune.configs.FinetuneModuleBaseConfig method) (mattertune.configs.JMPBackboneConfig method) (mattertune.configs.M3GNetBackboneConfig method) (mattertune.configs.ORBBackboneConfig method) (mattertune.configs.registry.FinetuneModuleBaseConfig method) (mattertune.finetune.base.FinetuneModuleBase method) (mattertune.finetune.base.FinetuneModuleBaseConfig method) create_normalization_context_from_batch() (mattertune.backbones.eqV2.model.EqV2BackboneModule method) (mattertune.backbones.jmp.model.JMPBackboneModule method) (mattertune.backbones.m3gnet.model.M3GNetBackboneModule method) (mattertune.backbones.orb.model.ORBBackboneModule method) (mattertune.finetune.base.FinetuneModuleBase method) create_normalizer_module() (mattertune.configs.normalization.NormalizerConfigBase method) (mattertune.configs.normalization.PerAtomReferencingNormalizerConfig method) (mattertune.configs.NormalizerConfigBase method) (mattertune.configs.PerAtomReferencingNormalizerConfig method) (mattertune.normalization.NormalizerConfigBase method) (mattertune.normalization.PerAtomReferencingNormalizerConfig method) create_normalizers() (mattertune.finetune.base.FinetuneModuleBase method) create_optimizer() (in module mattertune.finetune.optimizer) CSVLoggerConfig (class in mattertune.configs) (class in mattertune.configs.loggers) (class in mattertune.configs.main) (class in mattertune.loggers) cutoff (mattertune.backbones.m3gnet.model.M3GNetGraphComputerConfig attribute) (mattertune.configs.backbones.m3gnet.M3GNetGraphComputerConfig attribute) (mattertune.configs.backbones.m3gnet.model.M3GNetGraphComputerConfig attribute) (mattertune.configs.backbones.M3GNetGraphComputerConfig attribute) (mattertune.configs.M3GNetGraphComputerConfig attribute) cutoffs (mattertune.backbones.jmp.model.JMPGraphComputerConfig attribute) (mattertune.configs.backbones.jmp.JMPGraphComputerConfig attribute) (mattertune.configs.backbones.jmp.model.JMPGraphComputerConfig attribute) (mattertune.configs.backbones.JMPGraphComputerConfig attribute) (mattertune.configs.JMPGraphComputerConfig attribute) CutoffsConfig (class in mattertune.backbones.jmp.model) (class in mattertune.configs) (class in mattertune.configs.backbones) (class in mattertune.configs.backbones.jmp) (class in mattertune.configs.backbones.jmp.model)

D

data (mattertune.configs.main.MatterTunerConfig attribute) (mattertune.configs.MatterTunerConfig attribute) (mattertune.main.MatterTunerConfig attribute) data_registry (in module mattertune.registry) dataloader_kwargs() (mattertune.configs.data.datamodule.DataModuleBaseConfig method) (mattertune.configs.data.DataModuleBaseConfig method) (mattertune.configs.DataModuleBaseConfig method) (mattertune.data.datamodule.DataModuleBaseConfig method) DataLoaderKwargs (class in mattertune.finetune.loader) DataModuleBaseConfig (class in mattertune.configs) (class in mattertune.configs.data) (class in mattertune.configs.data.datamodule) (class in mattertune.data.datamodule) dataset (mattertune.configs.AutoSplitDataModuleConfig attribute) (mattertune.configs.data.AutoSplitDataModuleConfig attribute) (mattertune.configs.data.datamodule.AutoSplitDataModuleConfig attribute) (mattertune.data.datamodule.AutoSplitDataModuleConfig attribute) dataset_configs() (mattertune.configs.AutoSplitDataModuleConfig method) (mattertune.configs.data.AutoSplitDataModuleConfig method) (mattertune.configs.data.datamodule.AutoSplitDataModuleConfig method) (mattertune.configs.data.datamodule.DataModuleBaseConfig method) (mattertune.configs.data.datamodule.ManualSplitDataModuleConfig method) (mattertune.configs.data.DataModuleBaseConfig method) (mattertune.configs.data.ManualSplitDataModuleConfig method) (mattertune.configs.DataModuleBaseConfig method) (mattertune.configs.ManualSplitDataModuleConfig method) (mattertune.data.datamodule.AutoSplitDataModuleConfig method) (mattertune.data.datamodule.DataModuleBaseConfig method) (mattertune.data.datamodule.ManualSplitDataModuleConfig method) DatasetConfigBase (class in mattertune.configs) (class in mattertune.configs.data) (class in mattertune.configs.data.base) (class in mattertune.configs.data.db) (class in mattertune.configs.data.json_data) (class in mattertune.configs.data.matbench) (class in mattertune.configs.data.mp) (class in mattertune.configs.data.mptraj) (class in mattertune.configs.data.omat24) (class in mattertune.configs.data.xyz) (class in mattertune.data.base) DatasetMapping (class in mattertune.data.datamodule) DBDataset (class in mattertune.data.db) DBDatasetConfig (class in mattertune.configs) (class in mattertune.configs.data) (class in mattertune.configs.data.db) (class in mattertune.data.db) default_hp_metric (mattertune.configs.loggers.TensorBoardLoggerConfig attribute) (mattertune.configs.TensorBoardLoggerConfig attribute) (mattertune.loggers.TensorBoardLoggerConfig attribute)

delta (mattertune.configs.finetune.HuberLossConfig attribute) (mattertune.configs.finetune.loss.HuberLossConfig attribute) (mattertune.configs.HuberLossConfig attribute) (mattertune.finetune.loss.HuberLossConfig attribute) denormalize() (mattertune.finetune.base.FinetuneModuleBase method) (mattertune.normalization.ComposeNormalizers method) (mattertune.normalization.MeanStdNormalizerModule method) (mattertune.normalization.NormalizerModule method) (mattertune.normalization.PerAtomReferencingNormalizerModule method) (mattertune.normalization.RMSNormalizerModule method) deterministic (mattertune.configs.main.TrainerConfig attribute) (mattertune.configs.TrainerConfig attribute) (mattertune.main.TrainerConfig attribute) devices (mattertune.configs.main.TrainerConfig attribute) (mattertune.configs.TrainerConfig attribute) (mattertune.main.TrainerConfig attribute) dir (mattertune.configs.loggers.WandbLoggerConfig attribute) (mattertune.configs.WandbLoggerConfig attribute) (mattertune.loggers.WandbLoggerConfig attribute) dirpath (mattertune.callbacks.model_checkpoint.ModelCheckpointConfig attribute) (mattertune.configs.callbacks.model_checkpoint.ModelCheckpointConfig attribute) (mattertune.configs.callbacks.ModelCheckpointConfig attribute) (mattertune.configs.main.ModelCheckpointConfig attribute) (mattertune.configs.ModelCheckpointConfig attribute) divergence_threshold (mattertune.callbacks.early_stopping.EarlyStoppingConfig attribute) (mattertune.configs.callbacks.early_stopping.EarlyStoppingConfig attribute) (mattertune.configs.callbacks.EarlyStoppingConfig attribute) (mattertune.configs.EarlyStoppingConfig attribute) (mattertune.configs.main.EarlyStoppingConfig attribute) drop_last (mattertune.finetune.loader.DataLoaderKwargs attribute) DType (in module mattertune.finetune.properties) dtype (mattertune.configs.EnergyPropertyConfig attribute) (mattertune.configs.finetune.EnergyPropertyConfig attribute) (mattertune.configs.finetune.ForcesPropertyConfig attribute) (mattertune.configs.finetune.GraphPropertyConfig attribute) (mattertune.configs.finetune.properties.EnergyPropertyConfig attribute) (mattertune.configs.finetune.properties.ForcesPropertyConfig attribute) (mattertune.configs.finetune.properties.GraphPropertyConfig attribute) (mattertune.configs.finetune.properties.PropertyConfigBase attribute) (mattertune.configs.finetune.properties.StressesPropertyConfig attribute) (mattertune.configs.finetune.PropertyConfigBase attribute) (mattertune.configs.finetune.StressesPropertyConfig attribute) (mattertune.configs.ForcesPropertyConfig attribute) (mattertune.configs.PropertyConfigBase attribute) (mattertune.configs.StressesPropertyConfig attribute) (mattertune.finetune.properties.EnergyPropertyConfig attribute) (mattertune.finetune.properties.ForcesPropertyConfig attribute) (mattertune.finetune.properties.GraphPropertyConfig attribute) (mattertune.finetune.properties.PropertyConfigBase attribute) (mattertune.finetune.properties.StressesPropertyConfig attribute)

E

early_stopping (mattertune.configs.main.TrainerConfig attribute) (mattertune.configs.TrainerConfig attribute) (mattertune.main.TrainerConfig attribute) EarlyStoppingConfig (class in mattertune.callbacks.early_stopping) (class in mattertune.configs) (class in mattertune.configs.callbacks) (class in mattertune.configs.callbacks.early_stopping) (class in mattertune.configs.main) element_types (mattertune.backbones.m3gnet.model.M3GNetGraphComputerConfig attribute) (mattertune.configs.backbones.m3gnet.M3GNetGraphComputerConfig attribute) (mattertune.configs.backbones.m3gnet.model.M3GNetGraphComputerConfig attribute) (mattertune.configs.backbones.M3GNetGraphComputerConfig attribute) (mattertune.configs.M3GNetGraphComputerConfig attribute) elements (mattertune.configs.data.mptraj.MPTrajDatasetConfig attribute) (mattertune.configs.data.MPTrajDatasetConfig attribute) (mattertune.configs.MPTrajDatasetConfig attribute) (mattertune.data.mptraj.MPTrajDatasetConfig attribute) enable_version_counter (mattertune.callbacks.model_checkpoint.ModelCheckpointConfig attribute) (mattertune.configs.callbacks.model_checkpoint.ModelCheckpointConfig attribute) (mattertune.configs.callbacks.ModelCheckpointConfig attribute) (mattertune.configs.main.ModelCheckpointConfig attribute) (mattertune.configs.ModelCheckpointConfig attribute) energy_key (mattertune.configs.data.db.DBDatasetConfig attribute) (mattertune.configs.data.DBDatasetConfig attribute) (mattertune.configs.DBDatasetConfig attribute) (mattertune.data.db.DBDatasetConfig attribute) EnergyPropertyConfig (class in mattertune.configs) (class in mattertune.configs.finetune) (class in mattertune.configs.finetune.properties) (class in mattertune.finetune.properties) ensure_dependencies() (mattertune.backbones.eqV2.model.EqV2BackboneConfig class method) (mattertune.backbones.jmp.model.JMPBackboneConfig class method) (mattertune.backbones.m3gnet.model.M3GNetBackboneConfig class method) (mattertune.backbones.orb.model.ORBBackboneConfig class method) (mattertune.configs.backbones.eqV2.EqV2BackboneConfig class method) (mattertune.configs.backbones.eqV2.FinetuneModuleBaseConfig class method) (mattertune.configs.backbones.eqV2.model.EqV2BackboneConfig class method) (mattertune.configs.backbones.eqV2.model.FinetuneModuleBaseConfig class method) (mattertune.configs.backbones.EqV2BackboneConfig class method) (mattertune.configs.backbones.FinetuneModuleBaseConfig class method) (mattertune.configs.backbones.jmp.FinetuneModuleBaseConfig class method) (mattertune.configs.backbones.jmp.JMPBackboneConfig class method) (mattertune.configs.backbones.jmp.model.FinetuneModuleBaseConfig class method) (mattertune.configs.backbones.jmp.model.JMPBackboneConfig class method) (mattertune.configs.backbones.JMPBackboneConfig class method) (mattertune.configs.backbones.m3gnet.FinetuneModuleBaseConfig class method) (mattertune.configs.backbones.m3gnet.M3GNetBackboneConfig class method) (mattertune.configs.backbones.m3gnet.model.FinetuneModuleBaseConfig class method) (mattertune.configs.backbones.m3gnet.model.M3GNetBackboneConfig class method) (mattertune.configs.backbones.M3GNetBackboneConfig class method) (mattertune.configs.backbones.orb.FinetuneModuleBaseConfig class method) (mattertune.configs.backbones.orb.model.FinetuneModuleBaseConfig class method) (mattertune.configs.backbones.orb.model.ORBBackboneConfig class method) (mattertune.configs.backbones.orb.ORBBackboneConfig class method) (mattertune.configs.backbones.ORBBackboneConfig class method) (mattertune.configs.data.base.DatasetConfigBase class method) (mattertune.configs.data.DatasetConfigBase class method) (mattertune.configs.data.db.DatasetConfigBase class method) (mattertune.configs.data.json_data.DatasetConfigBase class method) (mattertune.configs.data.matbench.DatasetConfigBase class method) (mattertune.configs.data.mp.DatasetConfigBase class method) (mattertune.configs.data.mptraj.DatasetConfigBase class method) (mattertune.configs.data.omat24.DatasetConfigBase class method) (mattertune.configs.data.xyz.DatasetConfigBase class method) (mattertune.configs.DatasetConfigBase class method) (mattertune.configs.EqV2BackboneConfig class method) (mattertune.configs.finetune.base.FinetuneModuleBaseConfig class method) (mattertune.configs.finetune.FinetuneModuleBaseConfig class method) (mattertune.configs.FinetuneModuleBaseConfig class method) (mattertune.configs.JMPBackboneConfig class method) (mattertune.configs.M3GNetBackboneConfig class method) (mattertune.configs.ORBBackboneConfig class method) (mattertune.configs.registry.FinetuneModuleBaseConfig class method) (mattertune.data.base.DatasetConfigBase class method) (mattertune.finetune.base.FinetuneModuleBaseConfig class method)

eps (mattertune.configs.AdamConfig attribute) (mattertune.configs.AdamWConfig attribute) (mattertune.configs.finetune.AdamConfig attribute) (mattertune.configs.finetune.AdamWConfig attribute) (mattertune.configs.finetune.lr_scheduler.ReduceOnPlateauConfig attribute) (mattertune.configs.finetune.optimizer.AdamConfig attribute) (mattertune.configs.finetune.optimizer.AdamWConfig attribute) (mattertune.configs.finetune.ReduceOnPlateauConfig attribute) (mattertune.configs.ReduceOnPlateauConfig attribute) (mattertune.finetune.lr_scheduler.ReduceOnPlateauConfig attribute) (mattertune.finetune.optimizer.AdamConfig attribute) (mattertune.finetune.optimizer.AdamWConfig attribute) EqV2BackboneConfig (class in mattertune.backbones.eqV2.model) (class in mattertune.configs) (class in mattertune.configs.backbones) (class in mattertune.configs.backbones.eqV2) (class in mattertune.configs.backbones.eqV2.model) EqV2BackboneModule (class in mattertune.backbones.eqV2.model) eta_min (mattertune.configs.CosineAnnealingLRConfig attribute) (mattertune.configs.finetune.CosineAnnealingLRConfig attribute) (mattertune.configs.finetune.lr_scheduler.CosineAnnealingLRConfig attribute) (mattertune.finetune.lr_scheduler.CosineAnnealingLRConfig attribute) every_n_epochs (mattertune.callbacks.model_checkpoint.ModelCheckpointConfig attribute) (mattertune.configs.callbacks.model_checkpoint.ModelCheckpointConfig attribute) (mattertune.configs.callbacks.ModelCheckpointConfig attribute) (mattertune.configs.main.ModelCheckpointConfig attribute) (mattertune.configs.ModelCheckpointConfig attribute) every_n_train_steps (mattertune.callbacks.model_checkpoint.ModelCheckpointConfig attribute) (mattertune.configs.callbacks.model_checkpoint.ModelCheckpointConfig attribute) (mattertune.configs.callbacks.ModelCheckpointConfig attribute) (mattertune.configs.main.ModelCheckpointConfig attribute) (mattertune.configs.ModelCheckpointConfig attribute) experiment (mattertune.configs.loggers.WandbLoggerConfig attribute) (mattertune.configs.WandbLoggerConfig attribute) (mattertune.loggers.WandbLoggerConfig attribute) ExponentialConfig (class in mattertune.configs) (class in mattertune.configs.finetune) (class in mattertune.configs.finetune.lr_scheduler) (class in mattertune.finetune.lr_scheduler)

F

factor (mattertune.configs.finetune.lr_scheduler.ReduceOnPlateauConfig attribute) (mattertune.configs.finetune.ReduceOnPlateauConfig attribute) (mattertune.configs.ReduceOnPlateauConfig attribute) (mattertune.finetune.lr_scheduler.ReduceOnPlateauConfig attribute) FAIRChemAtomsToGraphSystemConfig (class in mattertune.backbones.eqV2.model) (class in mattertune.configs) (class in mattertune.configs.backbones) (class in mattertune.configs.backbones.eqV2) (class in mattertune.configs.backbones.eqV2.model) fields (mattertune.configs.data.mp.MPDatasetConfig attribute) (mattertune.configs.data.MPDatasetConfig attribute) (mattertune.configs.MPDatasetConfig attribute) (mattertune.data.mp.MPDatasetConfig attribute) filename (mattertune.callbacks.model_checkpoint.ModelCheckpointConfig attribute) (mattertune.configs.callbacks.model_checkpoint.ModelCheckpointConfig attribute) (mattertune.configs.callbacks.ModelCheckpointConfig attribute) (mattertune.configs.main.ModelCheckpointConfig attribute) (mattertune.configs.ModelCheckpointConfig attribute) FinetuneMetrics (class in mattertune.finetune.metrics) FinetuneModuleBase (class in mattertune.finetune.base) FinetuneModuleBaseConfig (class in mattertune.configs) (class in mattertune.configs.backbones) (class in mattertune.configs.backbones.eqV2) (class in mattertune.configs.backbones.eqV2.model) (class in mattertune.configs.backbones.jmp) (class in mattertune.configs.backbones.jmp.model) (class in mattertune.configs.backbones.m3gnet) (class in mattertune.configs.backbones.m3gnet.model) (class in mattertune.configs.backbones.orb) (class in mattertune.configs.backbones.orb.model) (class in mattertune.configs.finetune) (class in mattertune.configs.finetune.base) (class in mattertune.configs.registry) (class in mattertune.finetune.base) flush_logs_every_n_steps (mattertune.configs.CSVLoggerConfig attribute) (mattertune.configs.loggers.CSVLoggerConfig attribute) (mattertune.configs.main.CSVLoggerConfig attribute) (mattertune.loggers.CSVLoggerConfig attribute) fold_idx (mattertune.configs.data.matbench.MatbenchDatasetConfig attribute) (mattertune.configs.data.MatbenchDatasetConfig attribute) (mattertune.configs.MatbenchDatasetConfig attribute) (mattertune.data.matbench.MatbenchDatasetConfig attribute)

forces_key (mattertune.configs.data.db.DBDatasetConfig attribute) (mattertune.configs.data.DBDatasetConfig attribute) (mattertune.configs.DBDatasetConfig attribute) (mattertune.data.db.DBDatasetConfig attribute) ForcesPropertyConfig (class in mattertune.configs) (class in mattertune.configs.finetune) (class in mattertune.configs.finetune.properties) (class in mattertune.finetune.properties) forward() (mattertune.finetune.base.FinetuneModuleBase method) (mattertune.finetune.metrics.FinetuneMetrics method) (mattertune.finetune.metrics.MetricBase method) (mattertune.finetune.metrics.PropertyMetrics method) from_ase_atoms() (mattertune.configs.EnergyPropertyConfig method) (mattertune.configs.finetune.EnergyPropertyConfig method) (mattertune.configs.finetune.ForcesPropertyConfig method) (mattertune.configs.finetune.GraphPropertyConfig method) (mattertune.configs.finetune.properties.EnergyPropertyConfig method) (mattertune.configs.finetune.properties.ForcesPropertyConfig method) (mattertune.configs.finetune.properties.GraphPropertyConfig method) (mattertune.configs.finetune.properties.PropertyConfigBase method) (mattertune.configs.finetune.properties.StressesPropertyConfig method) (mattertune.configs.finetune.PropertyConfigBase method) (mattertune.configs.finetune.StressesPropertyConfig method) (mattertune.configs.ForcesPropertyConfig method) (mattertune.configs.GraphPropertyConfig method) (mattertune.configs.PropertyConfigBase method) (mattertune.configs.StressesPropertyConfig method) (mattertune.finetune.properties.EnergyPropertyConfig method) (mattertune.finetune.properties.ForcesPropertyConfig method) (mattertune.finetune.properties.GraphPropertyConfig method) (mattertune.finetune.properties.PropertyConfigBase method) (mattertune.finetune.properties.StressesPropertyConfig method) from_constant() (mattertune.backbones.jmp.model.CutoffsConfig class method) (mattertune.configs.backbones.CutoffsConfig class method) (mattertune.configs.backbones.jmp.CutoffsConfig class method) (mattertune.configs.backbones.jmp.model.CutoffsConfig class method) (mattertune.configs.CutoffsConfig class method) from_goc_base_proportions() (mattertune.backbones.jmp.model.MaxNeighborsConfig class method) (mattertune.configs.backbones.jmp.MaxNeighborsConfig class method) (mattertune.configs.backbones.jmp.model.MaxNeighborsConfig class method) (mattertune.configs.backbones.MaxNeighborsConfig class method) (mattertune.configs.MaxNeighborsConfig class method)

G

g (mattertune.backbones.m3gnet.model.MatGLBatch attribute) (mattertune.backbones.m3gnet.model.MatGLData attribute) gamma (mattertune.configs.ExponentialConfig attribute) (mattertune.configs.finetune.ExponentialConfig attribute) (mattertune.configs.finetune.lr_scheduler.ExponentialConfig attribute) (mattertune.configs.finetune.lr_scheduler.MultiStepLRConfig attribute) (mattertune.configs.finetune.lr_scheduler.StepLRConfig attribute) (mattertune.configs.finetune.MultiStepLRConfig attribute) (mattertune.configs.finetune.StepLRConfig attribute) (mattertune.configs.MultiStepLRConfig attribute) (mattertune.configs.StepLRConfig attribute) (mattertune.finetune.lr_scheduler.ExponentialConfig attribute) (mattertune.finetune.lr_scheduler.MultiStepLRConfig attribute) (mattertune.finetune.lr_scheduler.StepLRConfig attribute) generator (mattertune.finetune.loader.DataLoaderKwargs attribute) get_activation_cls() (in module mattertune.backbones.jmp.util) get_test_data() (mattertune.data.matbench.MatbenchDataset method) gpu_batch_transform() (mattertune.backbones.eqV2.model.EqV2BackboneModule method) (mattertune.backbones.jmp.model.JMPBackboneModule method) (mattertune.backbones.m3gnet.model.M3GNetBackboneModule method) (mattertune.backbones.orb.model.ORBBackboneModule method) (mattertune.finetune.base.FinetuneModuleBase method) gradient_clip_algorithm (mattertune.configs.main.TrainerConfig attribute) (mattertune.configs.TrainerConfig attribute) (mattertune.main.TrainerConfig attribute)

gradient_clip_val (mattertune.configs.main.TrainerConfig attribute) (mattertune.configs.TrainerConfig attribute) (mattertune.main.TrainerConfig attribute) graph_computer (mattertune.backbones.jmp.model.JMPBackboneConfig attribute) (mattertune.backbones.m3gnet.model.M3GNetBackboneConfig attribute) (mattertune.configs.backbones.jmp.JMPBackboneConfig attribute) (mattertune.configs.backbones.jmp.model.JMPBackboneConfig attribute) (mattertune.configs.backbones.JMPBackboneConfig attribute) (mattertune.configs.backbones.m3gnet.M3GNetBackboneConfig attribute) (mattertune.configs.backbones.m3gnet.model.M3GNetBackboneConfig attribute) (mattertune.configs.backbones.M3GNetBackboneConfig attribute) (mattertune.configs.JMPBackboneConfig attribute) (mattertune.configs.M3GNetBackboneConfig attribute) graph_labels (mattertune.backbones.m3gnet.model.M3GNetGraphComputerConfig attribute) (mattertune.configs.backbones.m3gnet.M3GNetGraphComputerConfig attribute) (mattertune.configs.backbones.m3gnet.model.M3GNetGraphComputerConfig attribute) (mattertune.configs.backbones.M3GNetGraphComputerConfig attribute) (mattertune.configs.M3GNetGraphComputerConfig attribute) GraphPropertyConfig (class in mattertune.configs) (class in mattertune.configs.finetune) (class in mattertune.configs.finetune.properties) (class in mattertune.finetune.properties)

H

hparams_cls() (mattertune.backbones.eqV2.model.EqV2BackboneModule class method) (mattertune.backbones.jmp.model.JMPBackboneModule class method) (mattertune.backbones.m3gnet.model.M3GNetBackboneModule class method) (mattertune.backbones.orb.model.ORBBackboneModule class method) (mattertune.finetune.base.FinetuneModuleBase class method)

HuberLossConfig (class in mattertune.configs) (class in mattertune.configs.finetune) (class in mattertune.configs.finetune.loss) (class in mattertune.finetune.loss)

I

id (mattertune.configs.loggers.WandbLoggerConfig attribute) (mattertune.configs.WandbLoggerConfig attribute) (mattertune.loggers.WandbLoggerConfig attribute) ignore_gpu_batch_transform_error (mattertune.configs.backbones.eqV2.EqV2BackboneConfig attribute) (mattertune.configs.backbones.eqV2.FinetuneModuleBaseConfig attribute) (mattertune.configs.backbones.eqV2.model.EqV2BackboneConfig attribute) (mattertune.configs.backbones.eqV2.model.FinetuneModuleBaseConfig attribute) (mattertune.configs.backbones.EqV2BackboneConfig attribute) (mattertune.configs.backbones.FinetuneModuleBaseConfig attribute) (mattertune.configs.backbones.jmp.FinetuneModuleBaseConfig attribute) (mattertune.configs.backbones.jmp.JMPBackboneConfig attribute) (mattertune.configs.backbones.jmp.model.FinetuneModuleBaseConfig attribute) (mattertune.configs.backbones.jmp.model.JMPBackboneConfig attribute) (mattertune.configs.backbones.JMPBackboneConfig attribute) (mattertune.configs.backbones.m3gnet.FinetuneModuleBaseConfig attribute) (mattertune.configs.backbones.m3gnet.M3GNetBackboneConfig attribute) (mattertune.configs.backbones.m3gnet.model.FinetuneModuleBaseConfig attribute) (mattertune.configs.backbones.m3gnet.model.M3GNetBackboneConfig attribute) (mattertune.configs.backbones.M3GNetBackboneConfig attribute) (mattertune.configs.backbones.orb.FinetuneModuleBaseConfig attribute) (mattertune.configs.backbones.orb.model.FinetuneModuleBaseConfig attribute) (mattertune.configs.backbones.orb.model.ORBBackboneConfig attribute) (mattertune.configs.backbones.orb.ORBBackboneConfig attribute) (mattertune.configs.backbones.ORBBackboneConfig attribute) (mattertune.configs.EqV2BackboneConfig attribute) (mattertune.configs.finetune.base.FinetuneModuleBaseConfig attribute) (mattertune.configs.finetune.FinetuneModuleBaseConfig attribute) (mattertune.configs.FinetuneModuleBaseConfig attribute) (mattertune.configs.JMPBackboneConfig attribute) (mattertune.configs.M3GNetBackboneConfig attribute) (mattertune.configs.ORBBackboneConfig attribute) (mattertune.configs.registry.FinetuneModuleBaseConfig attribute) (mattertune.finetune.base.FinetuneModuleBaseConfig attribute)

IterableDatasetWrapper (class in mattertune.finetune.data_util)

J

JMPBackboneConfig (class in mattertune.backbones.jmp.model) (class in mattertune.configs) (class in mattertune.configs.backbones) (class in mattertune.configs.backbones.jmp) (class in mattertune.configs.backbones.jmp.model) JMPBackboneModule (class in mattertune.backbones.jmp.model) JMPGraphComputerConfig (class in mattertune.backbones.jmp.model) (class in mattertune.configs) (class in mattertune.configs.backbones) (class in mattertune.configs.backbones.jmp) (class in mattertune.configs.backbones.jmp.model)

JSONDataset (class in mattertune.data.json_data) JSONDatasetConfig (class in mattertune.configs) (class in mattertune.configs.data) (class in mattertune.configs.data.json_data) (class in mattertune.data.json_data)

L

l2_mae_loss() (in module mattertune.finetune.loss) L2MAELossConfig (class in mattertune.configs) (class in mattertune.configs.finetune) (class in mattertune.configs.finetune.loss) (class in mattertune.finetune.loss) labels (mattertune.backbones.m3gnet.model.MatGLBatch attribute) (mattertune.backbones.m3gnet.model.MatGLData attribute) last_epoch (mattertune.configs.CosineAnnealingLRConfig attribute) (mattertune.configs.finetune.CosineAnnealingLRConfig attribute) (mattertune.configs.finetune.lr_scheduler.CosineAnnealingLRConfig attribute) (mattertune.finetune.lr_scheduler.CosineAnnealingLRConfig attribute) lattice (mattertune.backbones.m3gnet.model.MatGLBatch attribute) (mattertune.backbones.m3gnet.model.MatGLData attribute) lg (mattertune.backbones.m3gnet.model.MatGLBatch attribute) (mattertune.backbones.m3gnet.model.MatGLData attribute) lightning_module (mattertune.data.datamodule.MatterTuneDataModule property) log_every_n_steps (mattertune.configs.main.TrainerConfig attribute) (mattertune.configs.TrainerConfig attribute) (mattertune.main.TrainerConfig attribute) log_graph (mattertune.configs.loggers.TensorBoardLoggerConfig attribute) (mattertune.configs.TensorBoardLoggerConfig attribute) (mattertune.loggers.TensorBoardLoggerConfig attribute) log_model (mattertune.configs.loggers.WandbLoggerConfig attribute) (mattertune.configs.WandbLoggerConfig attribute) (mattertune.loggers.WandbLoggerConfig attribute) log_rank_zero_only (mattertune.callbacks.early_stopping.EarlyStoppingConfig attribute) (mattertune.configs.callbacks.early_stopping.EarlyStoppingConfig attribute) (mattertune.configs.callbacks.EarlyStoppingConfig attribute) (mattertune.configs.EarlyStoppingConfig attribute) (mattertune.configs.main.EarlyStoppingConfig attribute) loggers (mattertune.configs.main.TrainerConfig attribute) (mattertune.configs.TrainerConfig attribute) (mattertune.main.TrainerConfig attribute) loss (mattertune.configs.finetune.EnergyPropertyConfig attribute) (mattertune.configs.finetune.ForcesPropertyConfig attribute) (mattertune.configs.finetune.GraphPropertyConfig attribute) (mattertune.configs.finetune.properties.EnergyPropertyConfig attribute) (mattertune.configs.finetune.properties.ForcesPropertyConfig attribute) (mattertune.configs.finetune.properties.GraphPropertyConfig attribute) (mattertune.configs.finetune.properties.PropertyConfigBase attribute) (mattertune.configs.finetune.properties.StressesPropertyConfig attribute) (mattertune.configs.finetune.PropertyConfigBase attribute) (mattertune.configs.finetune.StressesPropertyConfig attribute) (mattertune.configs.PropertyConfigBase attribute) (mattertune.finetune.properties.EnergyPropertyConfig attribute) (mattertune.finetune.properties.ForcesPropertyConfig attribute) (mattertune.finetune.properties.GraphPropertyConfig attribute) (mattertune.finetune.properties.PropertyConfigBase attribute) (mattertune.finetune.properties.StressesPropertyConfig attribute) loss_coefficient (mattertune.configs.finetune.EnergyPropertyConfig attribute) (mattertune.configs.finetune.ForcesPropertyConfig attribute) (mattertune.configs.finetune.GraphPropertyConfig attribute) (mattertune.configs.finetune.properties.EnergyPropertyConfig attribute) (mattertune.configs.finetune.properties.ForcesPropertyConfig attribute) (mattertune.configs.finetune.properties.GraphPropertyConfig attribute) (mattertune.configs.finetune.properties.PropertyConfigBase attribute) (mattertune.configs.finetune.properties.StressesPropertyConfig attribute) (mattertune.configs.finetune.PropertyConfigBase attribute) (mattertune.configs.finetune.StressesPropertyConfig attribute) (mattertune.configs.PropertyConfigBase attribute) (mattertune.finetune.properties.EnergyPropertyConfig attribute) (mattertune.finetune.properties.ForcesPropertyConfig attribute) (mattertune.finetune.properties.GraphPropertyConfig attribute) (mattertune.finetune.properties.PropertyConfigBase attribute) (mattertune.finetune.properties.StressesPropertyConfig attribute)

lr (mattertune.configs.AdamConfig attribute) (mattertune.configs.AdamWConfig attribute) (mattertune.configs.finetune.AdamConfig attribute) (mattertune.configs.finetune.AdamWConfig attribute) (mattertune.configs.finetune.optimizer.AdamConfig attribute) (mattertune.configs.finetune.optimizer.AdamWConfig attribute) (mattertune.configs.finetune.optimizer.SGDConfig attribute) (mattertune.configs.finetune.SGDConfig attribute) (mattertune.configs.SGDConfig attribute) (mattertune.finetune.optimizer.AdamConfig attribute) (mattertune.finetune.optimizer.AdamWConfig attribute) (mattertune.finetune.optimizer.SGDConfig attribute) lr_scheduler (mattertune.configs.backbones.eqV2.EqV2BackboneConfig attribute) (mattertune.configs.backbones.eqV2.FinetuneModuleBaseConfig attribute) (mattertune.configs.backbones.eqV2.model.EqV2BackboneConfig attribute) (mattertune.configs.backbones.eqV2.model.FinetuneModuleBaseConfig attribute) (mattertune.configs.backbones.EqV2BackboneConfig attribute) (mattertune.configs.backbones.FinetuneModuleBaseConfig attribute) (mattertune.configs.backbones.jmp.FinetuneModuleBaseConfig attribute) (mattertune.configs.backbones.jmp.JMPBackboneConfig attribute) (mattertune.configs.backbones.jmp.model.FinetuneModuleBaseConfig attribute) (mattertune.configs.backbones.jmp.model.JMPBackboneConfig attribute) (mattertune.configs.backbones.JMPBackboneConfig attribute) (mattertune.configs.backbones.m3gnet.FinetuneModuleBaseConfig attribute) (mattertune.configs.backbones.m3gnet.M3GNetBackboneConfig attribute) (mattertune.configs.backbones.m3gnet.model.FinetuneModuleBaseConfig attribute) (mattertune.configs.backbones.m3gnet.model.M3GNetBackboneConfig attribute) (mattertune.configs.backbones.M3GNetBackboneConfig attribute) (mattertune.configs.backbones.orb.FinetuneModuleBaseConfig attribute) (mattertune.configs.backbones.orb.model.FinetuneModuleBaseConfig attribute) (mattertune.configs.backbones.orb.model.ORBBackboneConfig attribute) (mattertune.configs.backbones.orb.ORBBackboneConfig attribute) (mattertune.configs.backbones.ORBBackboneConfig attribute) (mattertune.configs.EqV2BackboneConfig attribute) (mattertune.configs.finetune.base.FinetuneModuleBaseConfig attribute) (mattertune.configs.finetune.FinetuneModuleBaseConfig attribute) (mattertune.configs.FinetuneModuleBaseConfig attribute) (mattertune.configs.JMPBackboneConfig attribute) (mattertune.configs.M3GNetBackboneConfig attribute) (mattertune.configs.ORBBackboneConfig attribute) (mattertune.configs.registry.FinetuneModuleBaseConfig attribute) (mattertune.finetune.base.FinetuneModuleBaseConfig attribute)

M

M3GNetBackboneConfig (class in mattertune.backbones.m3gnet.model) (class in mattertune.configs) (class in mattertune.configs.backbones) (class in mattertune.configs.backbones.m3gnet) (class in mattertune.configs.backbones.m3gnet.model) M3GNetBackboneModule (class in mattertune.backbones.m3gnet.model) M3GNetGraphComputerConfig (class in mattertune.backbones.m3gnet.model) (class in mattertune.configs) (class in mattertune.configs.backbones) (class in mattertune.configs.backbones.m3gnet) (class in mattertune.configs.backbones.m3gnet.model) MAELossConfig (class in mattertune.configs) (class in mattertune.configs.finetune) (class in mattertune.configs.finetune.loss) (class in mattertune.finetune.loss) main (mattertune.backbones.jmp.model.CutoffsConfig attribute) (mattertune.backbones.jmp.model.MaxNeighborsConfig attribute) (mattertune.configs.backbones.CutoffsConfig attribute) (mattertune.configs.backbones.jmp.CutoffsConfig attribute) (mattertune.configs.backbones.jmp.MaxNeighborsConfig attribute) (mattertune.configs.backbones.jmp.model.CutoffsConfig attribute) (mattertune.configs.backbones.jmp.model.MaxNeighborsConfig attribute) (mattertune.configs.backbones.MaxNeighborsConfig attribute) (mattertune.configs.CutoffsConfig attribute) (mattertune.configs.MaxNeighborsConfig attribute) ManualSplitDataModuleConfig (class in mattertune.configs) (class in mattertune.configs.data) (class in mattertune.configs.data.datamodule) (class in mattertune.data.datamodule) MapDatasetWrapper (class in mattertune.finetune.data_util) MatbenchDataset (class in mattertune.data.matbench) MatbenchDatasetConfig (class in mattertune.configs) (class in mattertune.configs.data) (class in mattertune.configs.data.matbench) (class in mattertune.data.matbench) MatGLBatch (class in mattertune.backbones.m3gnet.model) MatGLData (class in mattertune.backbones.m3gnet.model) mattertune.backbones module mattertune.backbones.eqV2 module mattertune.backbones.eqV2.model module mattertune.backbones.jmp module mattertune.backbones.jmp.model module mattertune.backbones.jmp.util module mattertune.backbones.m3gnet module mattertune.backbones.m3gnet.model module mattertune.backbones.orb module mattertune.backbones.orb.model module mattertune.backbones.util module mattertune.callbacks module mattertune.callbacks.early_stopping module mattertune.callbacks.model_checkpoint module mattertune.configs module mattertune.configs.backbones module mattertune.configs.backbones.eqV2 module mattertune.configs.backbones.eqV2.model module mattertune.configs.backbones.jmp module mattertune.configs.backbones.jmp.model module mattertune.configs.backbones.m3gnet module mattertune.configs.backbones.m3gnet.model module mattertune.configs.backbones.orb module mattertune.configs.backbones.orb.model module mattertune.configs.callbacks module mattertune.configs.callbacks.early_stopping module mattertune.configs.callbacks.model_checkpoint module mattertune.configs.data module mattertune.configs.data.base module mattertune.configs.data.datamodule module mattertune.configs.data.db module mattertune.configs.data.json_data module mattertune.configs.data.matbench module mattertune.configs.data.mp module mattertune.configs.data.mptraj module mattertune.configs.data.omat24 module mattertune.configs.data.xyz module mattertune.configs.finetune module mattertune.configs.finetune.base module mattertune.configs.finetune.loss module mattertune.configs.finetune.lr_scheduler module mattertune.configs.finetune.optimizer module mattertune.configs.finetune.properties module mattertune.configs.loggers module mattertune.configs.main module mattertune.configs.normalization module mattertune.configs.registry module mattertune.data module mattertune.data.base module mattertune.data.datamodule module mattertune.data.db module mattertune.data.json_data module mattertune.data.matbench module mattertune.data.mp module mattertune.data.mptraj module mattertune.data.omat24 module mattertune.data.xyz module mattertune.finetune module mattertune.finetune.base module mattertune.finetune.data_util module mattertune.finetune.loader module mattertune.finetune.loss module mattertune.finetune.lr_scheduler module mattertune.finetune.metrics module mattertune.finetune.optimizer module mattertune.finetune.properties module mattertune.loggers module mattertune.main module mattertune.normalization module mattertune.registry module mattertune.wrappers module mattertune.wrappers.ase_calculator module mattertune.wrappers.property_predictor module MatterTuneCalculator (class in mattertune.wrappers.ase_calculator) MatterTuneDataModule (class in mattertune.data.datamodule) MatterTunePropertyPredictor (class in mattertune.wrappers.property_predictor) MatterTuner (class in mattertune.main) MatterTunerConfig (class in mattertune.configs) (class in mattertune.configs.main) (class in mattertune.main) max_epochs (mattertune.configs.main.TrainerConfig attribute) (mattertune.configs.TrainerConfig attribute) (mattertune.main.TrainerConfig attribute) max_neighbors (mattertune.backbones.jmp.model.JMPGraphComputerConfig attribute) (mattertune.configs.backbones.jmp.JMPGraphComputerConfig attribute) (mattertune.configs.backbones.jmp.model.JMPGraphComputerConfig attribute) (mattertune.configs.backbones.JMPGraphComputerConfig attribute) (mattertune.configs.JMPGraphComputerConfig attribute) max_num_atoms (mattertune.configs.data.mptraj.MPTrajDatasetConfig attribute) (mattertune.configs.data.MPTrajDatasetConfig attribute) (mattertune.configs.MPTrajDatasetConfig attribute) (mattertune.data.mptraj.MPTrajDatasetConfig attribute)

max_num_neighbors (mattertune.backbones.eqV2.model.FAIRChemAtomsToGraphSystemConfig attribute) (mattertune.backbones.orb.model.ORBSystemConfig attribute) (mattertune.configs.backbones.eqV2.FAIRChemAtomsToGraphSystemConfig attribute) (mattertune.configs.backbones.eqV2.model.FAIRChemAtomsToGraphSystemConfig attribute) (mattertune.configs.backbones.FAIRChemAtomsToGraphSystemConfig attribute) (mattertune.configs.backbones.orb.model.ORBSystemConfig attribute) (mattertune.configs.backbones.orb.ORBSystemConfig attribute) (mattertune.configs.backbones.ORBSystemConfig attribute) (mattertune.configs.FAIRChemAtomsToGraphSystemConfig attribute) (mattertune.configs.ORBSystemConfig attribute) max_steps (mattertune.configs.main.TrainerConfig attribute) (mattertune.configs.TrainerConfig attribute) (mattertune.main.TrainerConfig attribute) max_time (mattertune.configs.main.TrainerConfig attribute) (mattertune.configs.TrainerConfig attribute) (mattertune.main.TrainerConfig attribute) MaxNeighborsConfig (class in mattertune.backbones.jmp.model) (class in mattertune.configs) (class in mattertune.configs.backbones) (class in mattertune.configs.backbones.jmp) (class in mattertune.configs.backbones.jmp.model) mean (mattertune.configs.MeanStdNormalizerConfig attribute) (mattertune.configs.normalization.MeanStdNormalizerConfig attribute) (mattertune.normalization.MeanStdNormalizerConfig attribute) (mattertune.normalization.MeanStdNormalizerModule attribute) MeanStdNormalizerConfig (class in mattertune.configs) (class in mattertune.configs.normalization) (class in mattertune.normalization) MeanStdNormalizerModule (class in mattertune.normalization) metric_cls() (mattertune.configs.finetune.properties.PropertyConfigBase class method) (mattertune.configs.finetune.PropertyConfigBase class method) (mattertune.configs.PropertyConfigBase class method) (mattertune.finetune.properties.PropertyConfigBase class method) MetricBase (class in mattertune.finetune.metrics) milestones (mattertune.configs.finetune.lr_scheduler.MultiStepLRConfig attribute) (mattertune.configs.finetune.MultiStepLRConfig attribute) (mattertune.configs.MultiStepLRConfig attribute) (mattertune.finetune.lr_scheduler.MultiStepLRConfig attribute) min_delta (mattertune.callbacks.early_stopping.EarlyStoppingConfig attribute) (mattertune.configs.callbacks.early_stopping.EarlyStoppingConfig attribute) (mattertune.configs.callbacks.EarlyStoppingConfig attribute) (mattertune.configs.EarlyStoppingConfig attribute) (mattertune.configs.main.EarlyStoppingConfig attribute) min_epochs (mattertune.configs.main.TrainerConfig attribute) (mattertune.configs.TrainerConfig attribute) (mattertune.main.TrainerConfig attribute) min_lr (mattertune.configs.finetune.lr_scheduler.ReduceOnPlateauConfig attribute) (mattertune.configs.finetune.ReduceOnPlateauConfig attribute) (mattertune.configs.ReduceOnPlateauConfig attribute) (mattertune.finetune.lr_scheduler.ReduceOnPlateauConfig attribute) min_num_atoms (mattertune.configs.data.mptraj.MPTrajDatasetConfig attribute) (mattertune.configs.data.MPTrajDatasetConfig attribute) (mattertune.configs.MPTrajDatasetConfig attribute) (mattertune.data.mptraj.MPTrajDatasetConfig attribute) min_steps (mattertune.configs.main.TrainerConfig attribute) (mattertune.configs.TrainerConfig attribute) (mattertune.main.TrainerConfig attribute) mode (mattertune.callbacks.early_stopping.EarlyStoppingConfig attribute) (mattertune.callbacks.model_checkpoint.ModelCheckpointConfig attribute) (mattertune.configs.callbacks.early_stopping.EarlyStoppingConfig attribute) (mattertune.configs.callbacks.EarlyStoppingConfig attribute) (mattertune.configs.callbacks.model_checkpoint.ModelCheckpointConfig attribute) (mattertune.configs.callbacks.ModelCheckpointConfig attribute) (mattertune.configs.EarlyStoppingConfig attribute) (mattertune.configs.finetune.lr_scheduler.ReduceOnPlateauConfig attribute) (mattertune.configs.finetune.ReduceOnPlateauConfig attribute) (mattertune.configs.main.EarlyStoppingConfig attribute) (mattertune.configs.main.ModelCheckpointConfig attribute) (mattertune.configs.ModelCheckpointConfig attribute) (mattertune.configs.ReduceOnPlateauConfig attribute) (mattertune.finetune.lr_scheduler.ReduceOnPlateauConfig attribute) model (mattertune.configs.main.MatterTunerConfig attribute) (mattertune.configs.MatterTunerConfig attribute) (mattertune.main.MatterTunerConfig attribute) (mattertune.main.TuneOutput attribute) model_forward() (mattertune.backbones.eqV2.model.EqV2BackboneModule method) (mattertune.backbones.jmp.model.JMPBackboneModule method) (mattertune.backbones.m3gnet.model.M3GNetBackboneModule method) (mattertune.backbones.orb.model.ORBBackboneModule method) (mattertune.finetune.base.FinetuneModuleBase method) model_forward_context() (mattertune.backbones.eqV2.model.EqV2BackboneModule method) (mattertune.backbones.jmp.model.JMPBackboneModule method) (mattertune.backbones.m3gnet.model.M3GNetBackboneModule method) (mattertune.backbones.orb.model.ORBBackboneModule method) (mattertune.finetune.base.FinetuneModuleBase method) ModelCheckpointConfig (class in mattertune.callbacks.model_checkpoint) (class in mattertune.configs) (class in mattertune.configs.callbacks) (class in mattertune.configs.callbacks.model_checkpoint) (class in mattertune.configs.main) ModelOutput (class in mattertune.finetune.base) module mattertune.backbones mattertune.backbones.eqV2 mattertune.backbones.eqV2.model mattertune.backbones.jmp mattertune.backbones.jmp.model mattertune.backbones.jmp.util mattertune.backbones.m3gnet mattertune.backbones.m3gnet.model mattertune.backbones.orb mattertune.backbones.orb.model mattertune.backbones.util mattertune.callbacks mattertune.callbacks.early_stopping mattertune.callbacks.model_checkpoint mattertune.configs mattertune.configs.backbones mattertune.configs.backbones.eqV2 mattertune.configs.backbones.eqV2.model mattertune.configs.backbones.jmp mattertune.configs.backbones.jmp.model mattertune.configs.backbones.m3gnet mattertune.configs.backbones.m3gnet.model mattertune.configs.backbones.orb mattertune.configs.backbones.orb.model mattertune.configs.callbacks mattertune.configs.callbacks.early_stopping mattertune.configs.callbacks.model_checkpoint mattertune.configs.data mattertune.configs.data.base mattertune.configs.data.datamodule mattertune.configs.data.db mattertune.configs.data.json_data mattertune.configs.data.matbench mattertune.configs.data.mp mattertune.configs.data.mptraj mattertune.configs.data.omat24 mattertune.configs.data.xyz mattertune.configs.finetune mattertune.configs.finetune.base mattertune.configs.finetune.loss mattertune.configs.finetune.lr_scheduler mattertune.configs.finetune.optimizer mattertune.configs.finetune.properties mattertune.configs.loggers mattertune.configs.main mattertune.configs.normalization mattertune.configs.registry mattertune.data mattertune.data.base mattertune.data.datamodule mattertune.data.db mattertune.data.json_data mattertune.data.matbench mattertune.data.mp mattertune.data.mptraj mattertune.data.omat24 mattertune.data.xyz mattertune.finetune mattertune.finetune.base mattertune.finetune.data_util mattertune.finetune.loader mattertune.finetune.loss mattertune.finetune.lr_scheduler mattertune.finetune.metrics mattertune.finetune.optimizer mattertune.finetune.properties mattertune.loggers mattertune.main mattertune.normalization mattertune.registry mattertune.wrappers mattertune.wrappers.ase_calculator mattertune.wrappers.property_predictor momentum (mattertune.configs.finetune.optimizer.SGDConfig attribute) (mattertune.configs.finetune.SGDConfig attribute) (mattertune.configs.SGDConfig attribute) (mattertune.finetune.optimizer.SGDConfig attribute) monitor (mattertune.callbacks.early_stopping.EarlyStoppingConfig attribute) (mattertune.callbacks.model_checkpoint.ModelCheckpointConfig attribute) (mattertune.configs.callbacks.early_stopping.EarlyStoppingConfig attribute) (mattertune.configs.callbacks.EarlyStoppingConfig attribute) (mattertune.configs.callbacks.model_checkpoint.ModelCheckpointConfig attribute) (mattertune.configs.callbacks.ModelCheckpointConfig attribute) (mattertune.configs.EarlyStoppingConfig attribute) (mattertune.configs.main.EarlyStoppingConfig attribute) (mattertune.configs.main.ModelCheckpointConfig attribute) (mattertune.configs.ModelCheckpointConfig attribute) MPDataset (class in mattertune.data.mp) MPDatasetConfig (class in mattertune.configs) (class in mattertune.configs.data) (class in mattertune.configs.data.mp) (class in mattertune.data.mp) MPTrajDataset (class in mattertune.data.mptraj) MPTrajDatasetConfig (class in mattertune.configs) (class in mattertune.configs.data) (class in mattertune.configs.data.mptraj) (class in mattertune.data.mptraj) MSELossConfig (class in mattertune.configs) (class in mattertune.configs.finetune) (class in mattertune.configs.finetune.loss) (class in mattertune.finetune.loss) multiprocessing_context (mattertune.finetune.loader.DataLoaderKwargs attribute) MultiStepLRConfig (class in mattertune.configs) (class in mattertune.configs.finetune) (class in mattertune.configs.finetune.lr_scheduler) (class in mattertune.finetune.lr_scheduler)

N

name (mattertune.backbones.eqV2.model.EqV2BackboneConfig attribute) (mattertune.backbones.jmp.model.JMPBackboneConfig attribute) (mattertune.backbones.m3gnet.model.M3GNetBackboneConfig attribute) (mattertune.backbones.orb.model.ORBBackboneConfig attribute) (mattertune.configs.AdamConfig attribute) (mattertune.configs.AdamWConfig attribute) (mattertune.configs.backbones.eqV2.EqV2BackboneConfig attribute) (mattertune.configs.backbones.eqV2.model.EqV2BackboneConfig attribute) (mattertune.configs.backbones.EqV2BackboneConfig attribute) (mattertune.configs.backbones.jmp.JMPBackboneConfig attribute) (mattertune.configs.backbones.jmp.model.JMPBackboneConfig attribute) (mattertune.configs.backbones.JMPBackboneConfig attribute) (mattertune.configs.backbones.m3gnet.M3GNetBackboneConfig attribute) (mattertune.configs.backbones.m3gnet.model.M3GNetBackboneConfig attribute) (mattertune.configs.backbones.M3GNetBackboneConfig attribute) (mattertune.configs.backbones.orb.model.ORBBackboneConfig attribute) (mattertune.configs.backbones.orb.ORBBackboneConfig attribute) (mattertune.configs.backbones.ORBBackboneConfig attribute) (mattertune.configs.CSVLoggerConfig attribute) (mattertune.configs.EnergyPropertyConfig attribute) (mattertune.configs.EqV2BackboneConfig attribute) (mattertune.configs.finetune.AdamConfig attribute) (mattertune.configs.finetune.AdamWConfig attribute) (mattertune.configs.finetune.EnergyPropertyConfig attribute) (mattertune.configs.finetune.ForcesPropertyConfig attribute) (mattertune.configs.finetune.GraphPropertyConfig attribute) (mattertune.configs.finetune.HuberLossConfig attribute) (mattertune.configs.finetune.L2MAELossConfig attribute) (mattertune.configs.finetune.loss.HuberLossConfig attribute) (mattertune.configs.finetune.loss.L2MAELossConfig attribute) (mattertune.configs.finetune.loss.MAELossConfig attribute) (mattertune.configs.finetune.loss.MSELossConfig attribute) (mattertune.configs.finetune.MAELossConfig attribute) (mattertune.configs.finetune.MSELossConfig attribute) (mattertune.configs.finetune.optimizer.AdamConfig attribute) (mattertune.configs.finetune.optimizer.AdamWConfig attribute) (mattertune.configs.finetune.optimizer.SGDConfig attribute) (mattertune.configs.finetune.properties.EnergyPropertyConfig attribute) (mattertune.configs.finetune.properties.ForcesPropertyConfig attribute) (mattertune.configs.finetune.properties.GraphPropertyConfig attribute) (mattertune.configs.finetune.properties.PropertyConfigBase attribute) (mattertune.configs.finetune.properties.StressesPropertyConfig attribute) (mattertune.configs.finetune.PropertyConfigBase attribute) (mattertune.configs.finetune.SGDConfig attribute) (mattertune.configs.finetune.StressesPropertyConfig attribute) (mattertune.configs.ForcesPropertyConfig attribute) (mattertune.configs.HuberLossConfig attribute) (mattertune.configs.JMPBackboneConfig attribute) (mattertune.configs.L2MAELossConfig attribute) (mattertune.configs.loggers.CSVLoggerConfig attribute) (mattertune.configs.loggers.TensorBoardLoggerConfig attribute) (mattertune.configs.loggers.WandbLoggerConfig attribute) (mattertune.configs.M3GNetBackboneConfig attribute) (mattertune.configs.MAELossConfig attribute) (mattertune.configs.main.CSVLoggerConfig attribute) (mattertune.configs.MSELossConfig attribute) (mattertune.configs.ORBBackboneConfig attribute) (mattertune.configs.PropertyConfigBase attribute) (mattertune.configs.SGDConfig attribute) (mattertune.configs.StressesPropertyConfig attribute) (mattertune.configs.TensorBoardLoggerConfig attribute) (mattertune.configs.WandbLoggerConfig attribute) (mattertune.finetune.loss.HuberLossConfig attribute) (mattertune.finetune.loss.L2MAELossConfig attribute) (mattertune.finetune.loss.MAELossConfig attribute) (mattertune.finetune.loss.MSELossConfig attribute) (mattertune.finetune.optimizer.AdamConfig attribute) (mattertune.finetune.optimizer.AdamWConfig attribute) (mattertune.finetune.optimizer.SGDConfig attribute) (mattertune.finetune.properties.EnergyPropertyConfig attribute) (mattertune.finetune.properties.ForcesPropertyConfig attribute) (mattertune.finetune.properties.GraphPropertyConfig attribute) (mattertune.finetune.properties.PropertyConfigBase attribute) (mattertune.finetune.properties.StressesPropertyConfig attribute) (mattertune.loggers.CSVLoggerConfig attribute) (mattertune.loggers.TensorBoardLoggerConfig attribute) (mattertune.loggers.WandbLoggerConfig attribute)

nestrov (mattertune.configs.finetune.optimizer.SGDConfig attribute) (mattertune.configs.finetune.SGDConfig attribute) (mattertune.configs.SGDConfig attribute) (mattertune.finetune.optimizer.SGDConfig attribute) NormalizationContext (class in mattertune.normalization) normalize() (mattertune.finetune.base.FinetuneModuleBase method) (mattertune.normalization.ComposeNormalizers method) (mattertune.normalization.MeanStdNormalizerModule method) (mattertune.normalization.NormalizerModule method) (mattertune.normalization.PerAtomReferencingNormalizerModule method) (mattertune.normalization.RMSNormalizerModule method) NormalizerConfigBase (class in mattertune.configs) (class in mattertune.configs.normalization) (class in mattertune.normalization) NormalizerModule (class in mattertune.normalization) normalizers (mattertune.configs.backbones.eqV2.EqV2BackboneConfig attribute) (mattertune.configs.backbones.eqV2.FinetuneModuleBaseConfig attribute) (mattertune.configs.backbones.eqV2.model.EqV2BackboneConfig attribute) (mattertune.configs.backbones.eqV2.model.FinetuneModuleBaseConfig attribute) (mattertune.configs.backbones.EqV2BackboneConfig attribute) (mattertune.configs.backbones.FinetuneModuleBaseConfig attribute) (mattertune.configs.backbones.jmp.FinetuneModuleBaseConfig attribute) (mattertune.configs.backbones.jmp.JMPBackboneConfig attribute) (mattertune.configs.backbones.jmp.model.FinetuneModuleBaseConfig attribute) (mattertune.configs.backbones.jmp.model.JMPBackboneConfig attribute) (mattertune.configs.backbones.JMPBackboneConfig attribute) (mattertune.configs.backbones.m3gnet.FinetuneModuleBaseConfig attribute) (mattertune.configs.backbones.m3gnet.M3GNetBackboneConfig attribute) (mattertune.configs.backbones.m3gnet.model.FinetuneModuleBaseConfig attribute) (mattertune.configs.backbones.m3gnet.model.M3GNetBackboneConfig attribute) (mattertune.configs.backbones.M3GNetBackboneConfig attribute) (mattertune.configs.backbones.orb.FinetuneModuleBaseConfig attribute) (mattertune.configs.backbones.orb.model.FinetuneModuleBaseConfig attribute) (mattertune.configs.backbones.orb.model.ORBBackboneConfig attribute) (mattertune.configs.backbones.orb.ORBBackboneConfig attribute) (mattertune.configs.backbones.ORBBackboneConfig attribute) (mattertune.configs.EqV2BackboneConfig attribute) (mattertune.configs.finetune.base.FinetuneModuleBaseConfig attribute) (mattertune.configs.finetune.FinetuneModuleBaseConfig attribute) (mattertune.configs.FinetuneModuleBaseConfig attribute) (mattertune.configs.JMPBackboneConfig attribute) (mattertune.configs.M3GNetBackboneConfig attribute) (mattertune.configs.ORBBackboneConfig attribute) (mattertune.configs.registry.FinetuneModuleBaseConfig attribute) (mattertune.finetune.base.FinetuneModuleBaseConfig attribute) num_nodes (mattertune.configs.main.TrainerConfig attribute) (mattertune.configs.TrainerConfig attribute) (mattertune.main.TrainerConfig attribute) num_workers (mattertune.configs.data.AutoSplitDataModuleConfig attribute) (mattertune.configs.data.datamodule.AutoSplitDataModuleConfig attribute) (mattertune.configs.data.datamodule.DataModuleBaseConfig attribute) (mattertune.configs.data.datamodule.ManualSplitDataModuleConfig attribute) (mattertune.configs.data.DataModuleBaseConfig attribute) (mattertune.configs.data.ManualSplitDataModuleConfig attribute) (mattertune.configs.DataModuleBaseConfig attribute) (mattertune.data.datamodule.AutoSplitDataModuleConfig attribute) (mattertune.data.datamodule.DataModuleBaseConfig attribute) (mattertune.data.datamodule.ManualSplitDataModuleConfig attribute) (mattertune.finetune.loader.DataLoaderKwargs attribute)

O

offline (mattertune.configs.loggers.WandbLoggerConfig attribute) (mattertune.configs.WandbLoggerConfig attribute) (mattertune.loggers.WandbLoggerConfig attribute) OMAT24Dataset (class in mattertune.data.omat24) OMAT24DatasetConfig (class in mattertune.configs) (class in mattertune.configs.data) (class in mattertune.configs.data.omat24) (class in mattertune.data.omat24) optimizer (mattertune.configs.backbones.eqV2.EqV2BackboneConfig attribute) (mattertune.configs.backbones.eqV2.FinetuneModuleBaseConfig attribute) (mattertune.configs.backbones.eqV2.model.EqV2BackboneConfig attribute) (mattertune.configs.backbones.eqV2.model.FinetuneModuleBaseConfig attribute) (mattertune.configs.backbones.EqV2BackboneConfig attribute) (mattertune.configs.backbones.FinetuneModuleBaseConfig attribute) (mattertune.configs.backbones.jmp.FinetuneModuleBaseConfig attribute) (mattertune.configs.backbones.jmp.JMPBackboneConfig attribute) (mattertune.configs.backbones.jmp.model.FinetuneModuleBaseConfig attribute) (mattertune.configs.backbones.jmp.model.JMPBackboneConfig attribute) (mattertune.configs.backbones.JMPBackboneConfig attribute) (mattertune.configs.backbones.m3gnet.FinetuneModuleBaseConfig attribute) (mattertune.configs.backbones.m3gnet.M3GNetBackboneConfig attribute) (mattertune.configs.backbones.m3gnet.model.FinetuneModuleBaseConfig attribute) (mattertune.configs.backbones.m3gnet.model.M3GNetBackboneConfig attribute) (mattertune.configs.backbones.M3GNetBackboneConfig attribute) (mattertune.configs.backbones.orb.FinetuneModuleBaseConfig attribute) (mattertune.configs.backbones.orb.model.FinetuneModuleBaseConfig attribute) (mattertune.configs.backbones.orb.model.ORBBackboneConfig attribute) (mattertune.configs.backbones.orb.ORBBackboneConfig attribute) (mattertune.configs.backbones.ORBBackboneConfig attribute) (mattertune.configs.EqV2BackboneConfig attribute) (mattertune.configs.finetune.base.FinetuneModuleBaseConfig attribute) (mattertune.configs.finetune.FinetuneModuleBaseConfig attribute) (mattertune.configs.FinetuneModuleBaseConfig attribute) (mattertune.configs.JMPBackboneConfig attribute) (mattertune.configs.M3GNetBackboneConfig attribute) (mattertune.configs.ORBBackboneConfig attribute) (mattertune.configs.registry.FinetuneModuleBaseConfig attribute) (mattertune.finetune.base.FinetuneModuleBaseConfig attribute)

ORBBackboneConfig (class in mattertune.backbones.orb.model) (class in mattertune.configs) (class in mattertune.configs.backbones) (class in mattertune.configs.backbones.orb) (class in mattertune.configs.backbones.orb.model) ORBBackboneModule (class in mattertune.backbones.orb.model) ORBSystemConfig (class in mattertune.backbones.orb.model) (class in mattertune.configs) (class in mattertune.configs.backbones) (class in mattertune.configs.backbones.orb) (class in mattertune.configs.backbones.orb.model) output_head_parameters() (mattertune.backbones.eqV2.model.EqV2BackboneModule method) (mattertune.backbones.jmp.model.JMPBackboneModule method) (mattertune.backbones.m3gnet.model.M3GNetBackboneModule method) (mattertune.backbones.orb.model.ORBBackboneModule method) (mattertune.finetune.base.FinetuneModuleBase method)

P

patience (mattertune.callbacks.early_stopping.EarlyStoppingConfig attribute) (mattertune.configs.callbacks.early_stopping.EarlyStoppingConfig attribute) (mattertune.configs.callbacks.EarlyStoppingConfig attribute) (mattertune.configs.EarlyStoppingConfig attribute) (mattertune.configs.finetune.lr_scheduler.ReduceOnPlateauConfig attribute) (mattertune.configs.finetune.ReduceOnPlateauConfig attribute) (mattertune.configs.main.EarlyStoppingConfig attribute) (mattertune.configs.ReduceOnPlateauConfig attribute) (mattertune.finetune.lr_scheduler.ReduceOnPlateauConfig attribute) pbc (mattertune.backbones.jmp.model.JMPGraphComputerConfig attribute) (mattertune.configs.backbones.jmp.JMPGraphComputerConfig attribute) (mattertune.configs.backbones.jmp.model.JMPGraphComputerConfig attribute) (mattertune.configs.backbones.JMPGraphComputerConfig attribute) (mattertune.configs.JMPGraphComputerConfig attribute) per_atom_references (mattertune.configs.normalization.PerAtomReferencingNormalizerConfig attribute) (mattertune.configs.PerAtomReferencingNormalizerConfig attribute) (mattertune.normalization.PerAtomReferencingNormalizerConfig attribute) per_graph_radius_graph (mattertune.backbones.jmp.model.JMPGraphComputerConfig attribute) (mattertune.configs.backbones.jmp.JMPGraphComputerConfig attribute) (mattertune.configs.backbones.jmp.model.JMPGraphComputerConfig attribute) (mattertune.configs.backbones.JMPGraphComputerConfig attribute) (mattertune.configs.JMPGraphComputerConfig attribute) PerAtomReferencingNormalizerConfig (class in mattertune.configs) (class in mattertune.configs.normalization) (class in mattertune.normalization) PerAtomReferencingNormalizerModule (class in mattertune.normalization) persistent_workers (mattertune.finetune.loader.DataLoaderKwargs attribute) pin_memory (mattertune.configs.data.AutoSplitDataModuleConfig attribute) (mattertune.configs.data.datamodule.AutoSplitDataModuleConfig attribute) (mattertune.configs.data.datamodule.DataModuleBaseConfig attribute) (mattertune.configs.data.datamodule.ManualSplitDataModuleConfig attribute) (mattertune.configs.data.DataModuleBaseConfig attribute) (mattertune.configs.data.ManualSplitDataModuleConfig attribute) (mattertune.configs.DataModuleBaseConfig attribute) (mattertune.data.datamodule.AutoSplitDataModuleConfig attribute) (mattertune.data.datamodule.DataModuleBaseConfig attribute) (mattertune.data.datamodule.ManualSplitDataModuleConfig attribute) (mattertune.finetune.loader.DataLoaderKwargs attribute) pin_memory_device (mattertune.finetune.loader.DataLoaderKwargs attribute) pre_compute_line_graph (mattertune.backbones.m3gnet.model.M3GNetGraphComputerConfig attribute) (mattertune.configs.backbones.m3gnet.M3GNetGraphComputerConfig attribute) (mattertune.configs.backbones.m3gnet.model.M3GNetGraphComputerConfig attribute) (mattertune.configs.backbones.M3GNetGraphComputerConfig attribute) (mattertune.configs.M3GNetGraphComputerConfig attribute) precision (mattertune.configs.main.TrainerConfig attribute) (mattertune.configs.TrainerConfig attribute) (mattertune.main.TrainerConfig attribute) predict() (mattertune.wrappers.property_predictor.MatterTunePropertyPredictor method) predict_step() (mattertune.finetune.base.FinetuneModuleBase method) predicted_properties (mattertune.finetune.base.ModelOutput attribute) prefetch_factor (mattertune.finetune.loader.DataLoaderKwargs attribute) prefix (mattertune.configs.CSVLoggerConfig attribute) (mattertune.configs.loggers.CSVLoggerConfig attribute) (mattertune.configs.loggers.TensorBoardLoggerConfig attribute) (mattertune.configs.loggers.WandbLoggerConfig attribute) (mattertune.configs.main.CSVLoggerConfig attribute) (mattertune.configs.TensorBoardLoggerConfig attribute) (mattertune.configs.WandbLoggerConfig attribute) (mattertune.loggers.CSVLoggerConfig attribute) (mattertune.loggers.TensorBoardLoggerConfig attribute) (mattertune.loggers.WandbLoggerConfig attribute) preload (mattertune.configs.data.db.DBDatasetConfig attribute) (mattertune.configs.data.DBDatasetConfig attribute) (mattertune.configs.DBDatasetConfig attribute) (mattertune.data.db.DBDatasetConfig attribute) prepare_data() (mattertune.configs.data.base.DatasetConfigBase method) (mattertune.configs.data.DatasetConfigBase method) (mattertune.configs.data.db.DatasetConfigBase method) (mattertune.configs.data.json_data.DatasetConfigBase method) (mattertune.configs.data.matbench.DatasetConfigBase method) (mattertune.configs.data.mp.DatasetConfigBase method) (mattertune.configs.data.mptraj.DatasetConfigBase method) (mattertune.configs.data.omat24.DatasetConfigBase method) (mattertune.configs.data.xyz.DatasetConfigBase method) (mattertune.configs.DatasetConfigBase method) (mattertune.data.base.DatasetConfigBase method) (mattertune.data.datamodule.MatterTuneDataModule method) prepare_data_per_node (mattertune.data.datamodule.MatterTuneDataModule attribute) prepare_value_for_ase_calculator() (mattertune.configs.EnergyPropertyConfig method) (mattertune.configs.finetune.EnergyPropertyConfig method) (mattertune.configs.finetune.properties.EnergyPropertyConfig method) (mattertune.configs.finetune.properties.PropertyConfigBase method) (mattertune.configs.finetune.properties.StressesPropertyConfig method) (mattertune.configs.finetune.PropertyConfigBase method) (mattertune.configs.finetune.StressesPropertyConfig method) (mattertune.configs.PropertyConfigBase method) (mattertune.configs.StressesPropertyConfig method) (mattertune.finetune.properties.EnergyPropertyConfig method) (mattertune.finetune.properties.PropertyConfigBase method) (mattertune.finetune.properties.StressesPropertyConfig method)

pretrained_backbone_parameters() (mattertune.backbones.eqV2.model.EqV2BackboneModule method) (mattertune.backbones.jmp.model.JMPBackboneModule method) (mattertune.backbones.m3gnet.model.M3GNetBackboneModule method) (mattertune.backbones.orb.model.ORBBackboneModule method) (mattertune.finetune.base.FinetuneModuleBase method) pretrained_model (mattertune.backbones.orb.model.ORBBackboneConfig attribute) (mattertune.configs.backbones.orb.model.ORBBackboneConfig attribute) (mattertune.configs.backbones.orb.ORBBackboneConfig attribute) (mattertune.configs.backbones.ORBBackboneConfig attribute) (mattertune.configs.ORBBackboneConfig attribute) project (mattertune.configs.loggers.WandbLoggerConfig attribute) (mattertune.configs.WandbLoggerConfig attribute) (mattertune.loggers.WandbLoggerConfig attribute) properties (mattertune.configs.backbones.eqV2.EqV2BackboneConfig attribute) (mattertune.configs.backbones.eqV2.FinetuneModuleBaseConfig attribute) (mattertune.configs.backbones.eqV2.model.EqV2BackboneConfig attribute) (mattertune.configs.backbones.eqV2.model.FinetuneModuleBaseConfig attribute) (mattertune.configs.backbones.EqV2BackboneConfig attribute) (mattertune.configs.backbones.FinetuneModuleBaseConfig attribute) (mattertune.configs.backbones.jmp.FinetuneModuleBaseConfig attribute) (mattertune.configs.backbones.jmp.JMPBackboneConfig attribute) (mattertune.configs.backbones.jmp.model.FinetuneModuleBaseConfig attribute) (mattertune.configs.backbones.jmp.model.JMPBackboneConfig attribute) (mattertune.configs.backbones.JMPBackboneConfig attribute) (mattertune.configs.backbones.m3gnet.FinetuneModuleBaseConfig attribute) (mattertune.configs.backbones.m3gnet.M3GNetBackboneConfig attribute) (mattertune.configs.backbones.m3gnet.model.FinetuneModuleBaseConfig attribute) (mattertune.configs.backbones.m3gnet.model.M3GNetBackboneConfig attribute) (mattertune.configs.backbones.M3GNetBackboneConfig attribute) (mattertune.configs.backbones.orb.FinetuneModuleBaseConfig attribute) (mattertune.configs.backbones.orb.model.FinetuneModuleBaseConfig attribute) (mattertune.configs.backbones.orb.model.ORBBackboneConfig attribute) (mattertune.configs.backbones.orb.ORBBackboneConfig attribute) (mattertune.configs.backbones.ORBBackboneConfig attribute) (mattertune.configs.EqV2BackboneConfig attribute) (mattertune.configs.finetune.base.FinetuneModuleBaseConfig attribute) (mattertune.configs.finetune.FinetuneModuleBaseConfig attribute) (mattertune.configs.FinetuneModuleBaseConfig attribute) (mattertune.configs.JMPBackboneConfig attribute) (mattertune.configs.M3GNetBackboneConfig attribute) (mattertune.configs.ORBBackboneConfig attribute) (mattertune.configs.registry.FinetuneModuleBaseConfig attribute) (mattertune.finetune.base.FinetuneModuleBaseConfig attribute) property_name (mattertune.configs.data.matbench.MatbenchDatasetConfig attribute) (mattertune.configs.data.MatbenchDatasetConfig attribute) (mattertune.configs.MatbenchDatasetConfig attribute) (mattertune.data.matbench.MatbenchDatasetConfig attribute) property_predictor() (mattertune.finetune.base.FinetuneModuleBase method) property_type() (mattertune.configs.EnergyPropertyConfig method) (mattertune.configs.finetune.EnergyPropertyConfig method) (mattertune.configs.finetune.ForcesPropertyConfig method) (mattertune.configs.finetune.GraphPropertyConfig method) (mattertune.configs.finetune.properties.EnergyPropertyConfig method) (mattertune.configs.finetune.properties.ForcesPropertyConfig method) (mattertune.configs.finetune.properties.GraphPropertyConfig method) (mattertune.configs.finetune.properties.PropertyConfigBase method) (mattertune.configs.finetune.properties.StressesPropertyConfig method) (mattertune.configs.finetune.PropertyConfigBase method) (mattertune.configs.finetune.StressesPropertyConfig method) (mattertune.configs.ForcesPropertyConfig method) (mattertune.configs.GraphPropertyConfig method) (mattertune.configs.PropertyConfigBase method) (mattertune.configs.StressesPropertyConfig method) (mattertune.finetune.properties.EnergyPropertyConfig method) (mattertune.finetune.properties.ForcesPropertyConfig method) (mattertune.finetune.properties.GraphPropertyConfig method) (mattertune.finetune.properties.PropertyConfigBase method) (mattertune.finetune.properties.StressesPropertyConfig method) PropertyConfigBase (class in mattertune.configs) (class in mattertune.configs.finetune) (class in mattertune.configs.finetune.properties) (class in mattertune.finetune.properties) PropertyMetrics (class in mattertune.finetune.metrics)

Q

qint (mattertune.backbones.jmp.model.CutoffsConfig attribute) (mattertune.backbones.jmp.model.MaxNeighborsConfig attribute) (mattertune.configs.backbones.CutoffsConfig attribute) (mattertune.configs.backbones.jmp.CutoffsConfig attribute) (mattertune.configs.backbones.jmp.MaxNeighborsConfig attribute) (mattertune.configs.backbones.jmp.model.CutoffsConfig attribute) (mattertune.configs.backbones.jmp.model.MaxNeighborsConfig attribute) (mattertune.configs.backbones.MaxNeighborsConfig attribute) (mattertune.configs.CutoffsConfig attribute) (mattertune.configs.MaxNeighborsConfig attribute)

query (mattertune.configs.data.mp.MPDatasetConfig attribute) (mattertune.configs.data.MPDatasetConfig attribute) (mattertune.configs.MPDatasetConfig attribute) (mattertune.data.mp.MPDatasetConfig attribute)

R

radius (mattertune.backbones.eqV2.model.FAIRChemAtomsToGraphSystemConfig attribute) (mattertune.backbones.orb.model.ORBSystemConfig attribute) (mattertune.configs.backbones.eqV2.FAIRChemAtomsToGraphSystemConfig attribute) (mattertune.configs.backbones.eqV2.model.FAIRChemAtomsToGraphSystemConfig attribute) (mattertune.configs.backbones.FAIRChemAtomsToGraphSystemConfig attribute) (mattertune.configs.backbones.orb.model.ORBSystemConfig attribute) (mattertune.configs.backbones.orb.ORBSystemConfig attribute) (mattertune.configs.backbones.ORBSystemConfig attribute) (mattertune.configs.FAIRChemAtomsToGraphSystemConfig attribute) (mattertune.configs.ORBSystemConfig attribute) ReduceOnPlateauConfig (class in mattertune.configs) (class in mattertune.configs.finetune) (class in mattertune.configs.finetune.lr_scheduler) (class in mattertune.finetune.lr_scheduler) reduction (mattertune.configs.finetune.GraphPropertyConfig attribute) (mattertune.configs.finetune.HuberLossConfig attribute) (mattertune.configs.finetune.L2MAELossConfig attribute) (mattertune.configs.finetune.loss.HuberLossConfig attribute) (mattertune.configs.finetune.loss.L2MAELossConfig attribute) (mattertune.configs.finetune.loss.MAELossConfig attribute) (mattertune.configs.finetune.loss.MSELossConfig attribute) (mattertune.configs.finetune.MAELossConfig attribute) (mattertune.configs.finetune.MSELossConfig attribute) (mattertune.configs.finetune.properties.GraphPropertyConfig attribute) (mattertune.configs.GraphPropertyConfig attribute) (mattertune.configs.HuberLossConfig attribute) (mattertune.configs.L2MAELossConfig attribute) (mattertune.configs.MAELossConfig attribute) (mattertune.configs.MSELossConfig attribute) (mattertune.finetune.loss.HuberLossConfig attribute) (mattertune.finetune.loss.L2MAELossConfig attribute) (mattertune.finetune.loss.MAELossConfig attribute) (mattertune.finetune.loss.MSELossConfig attribute) (mattertune.finetune.properties.GraphPropertyConfig attribute)

references (mattertune.normalization.PerAtomReferencingNormalizerModule attribute) requires_disabled_inference_mode() (mattertune.backbones.eqV2.model.EqV2BackboneModule method) (mattertune.backbones.jmp.model.JMPBackboneModule method) (mattertune.backbones.m3gnet.model.M3GNetBackboneModule method) (mattertune.backbones.orb.model.ORBBackboneModule method) (mattertune.finetune.base.FinetuneModuleBase method) rms (mattertune.configs.normalization.RMSNormalizerConfig attribute) (mattertune.configs.RMSNormalizerConfig attribute) (mattertune.normalization.RMSNormalizerConfig attribute) (mattertune.normalization.RMSNormalizerModule attribute) RMSNormalizerConfig (class in mattertune.configs) (class in mattertune.configs.normalization) (class in mattertune.normalization) RMSNormalizerModule (class in mattertune.normalization)

S

sampler (mattertune.finetune.loader.DataLoaderKwargs attribute) save_dir (mattertune.configs.CSVLoggerConfig attribute) (mattertune.configs.loggers.CSVLoggerConfig attribute) (mattertune.configs.loggers.TensorBoardLoggerConfig attribute) (mattertune.configs.loggers.WandbLoggerConfig attribute) (mattertune.configs.main.CSVLoggerConfig attribute) (mattertune.configs.TensorBoardLoggerConfig attribute) (mattertune.configs.WandbLoggerConfig attribute) (mattertune.loggers.CSVLoggerConfig attribute) (mattertune.loggers.TensorBoardLoggerConfig attribute) (mattertune.loggers.WandbLoggerConfig attribute) save_last (mattertune.callbacks.model_checkpoint.ModelCheckpointConfig attribute) (mattertune.configs.callbacks.model_checkpoint.ModelCheckpointConfig attribute) (mattertune.configs.callbacks.ModelCheckpointConfig attribute) (mattertune.configs.main.ModelCheckpointConfig attribute) (mattertune.configs.ModelCheckpointConfig attribute) save_on_train_epoch_end (mattertune.callbacks.model_checkpoint.ModelCheckpointConfig attribute) (mattertune.configs.callbacks.model_checkpoint.ModelCheckpointConfig attribute) (mattertune.configs.callbacks.ModelCheckpointConfig attribute) (mattertune.configs.main.ModelCheckpointConfig attribute) (mattertune.configs.ModelCheckpointConfig attribute) save_top_k (mattertune.callbacks.model_checkpoint.ModelCheckpointConfig attribute) (mattertune.configs.callbacks.model_checkpoint.ModelCheckpointConfig attribute) (mattertune.configs.callbacks.ModelCheckpointConfig attribute) (mattertune.configs.main.ModelCheckpointConfig attribute) (mattertune.configs.ModelCheckpointConfig attribute) save_weights_only (mattertune.callbacks.model_checkpoint.ModelCheckpointConfig attribute) (mattertune.configs.callbacks.model_checkpoint.ModelCheckpointConfig attribute) (mattertune.configs.callbacks.ModelCheckpointConfig attribute) (mattertune.configs.main.ModelCheckpointConfig attribute) (mattertune.configs.ModelCheckpointConfig attribute) setup() (mattertune.backbones.m3gnet.model.M3GNetBackboneModule method) (mattertune.data.datamodule.MatterTuneDataModule method) SGDConfig (class in mattertune.configs) (class in mattertune.configs.finetune) (class in mattertune.configs.finetune.optimizer) (class in mattertune.finetune.optimizer) shuffle (mattertune.configs.AutoSplitDataModuleConfig attribute) (mattertune.configs.data.AutoSplitDataModuleConfig attribute) (mattertune.configs.data.datamodule.AutoSplitDataModuleConfig attribute) (mattertune.data.datamodule.AutoSplitDataModuleConfig attribute) (mattertune.finetune.loader.DataLoaderKwargs attribute) shuffle_seed (mattertune.configs.AutoSplitDataModuleConfig attribute) (mattertune.configs.data.AutoSplitDataModuleConfig attribute) (mattertune.configs.data.datamodule.AutoSplitDataModuleConfig attribute) (mattertune.data.datamodule.AutoSplitDataModuleConfig attribute) split (mattertune.configs.data.mptraj.MPTrajDatasetConfig attribute) (mattertune.configs.data.MPTrajDatasetConfig attribute) (mattertune.configs.MPTrajDatasetConfig attribute) (mattertune.data.mptraj.MPTrajDatasetConfig attribute) src (mattertune.configs.data.db.DBDatasetConfig attribute) (mattertune.configs.data.DBDatasetConfig attribute) (mattertune.configs.data.json_data.JSONDatasetConfig attribute) (mattertune.configs.data.JSONDatasetConfig attribute) (mattertune.configs.data.omat24.OMAT24DatasetConfig attribute) (mattertune.configs.data.OMAT24DatasetConfig attribute) (mattertune.configs.data.xyz.XYZDatasetConfig attribute) (mattertune.configs.data.XYZDatasetConfig attribute) (mattertune.configs.DBDatasetConfig attribute) (mattertune.configs.JSONDatasetConfig attribute) (mattertune.configs.OMAT24DatasetConfig attribute) (mattertune.configs.XYZDatasetConfig attribute) (mattertune.data.db.DBDatasetConfig attribute) (mattertune.data.json_data.JSONDatasetConfig attribute) (mattertune.data.omat24.OMAT24DatasetConfig attribute) (mattertune.data.xyz.XYZDatasetConfig attribute)

state_attr (mattertune.backbones.m3gnet.model.MatGLBatch attribute) (mattertune.backbones.m3gnet.model.MatGLData attribute) std (mattertune.configs.MeanStdNormalizerConfig attribute) (mattertune.configs.normalization.MeanStdNormalizerConfig attribute) (mattertune.normalization.MeanStdNormalizerConfig attribute) (mattertune.normalization.MeanStdNormalizerModule attribute) step_size (mattertune.configs.finetune.lr_scheduler.StepLRConfig attribute) (mattertune.configs.finetune.StepLRConfig attribute) (mattertune.configs.StepLRConfig attribute) (mattertune.finetune.lr_scheduler.StepLRConfig attribute) StepLRConfig (class in mattertune.configs) (class in mattertune.configs.finetune) (class in mattertune.configs.finetune.lr_scheduler) (class in mattertune.finetune.lr_scheduler) stopping_threshold (mattertune.callbacks.early_stopping.EarlyStoppingConfig attribute) (mattertune.configs.callbacks.early_stopping.EarlyStoppingConfig attribute) (mattertune.configs.callbacks.EarlyStoppingConfig attribute) (mattertune.configs.EarlyStoppingConfig attribute) (mattertune.configs.main.EarlyStoppingConfig attribute) strain (mattertune.backbones.m3gnet.model.MatGLBatch attribute) strategy (mattertune.configs.main.TrainerConfig attribute) (mattertune.configs.TrainerConfig attribute) (mattertune.main.TrainerConfig attribute) stress_key (mattertune.configs.data.db.DBDatasetConfig attribute) (mattertune.configs.data.DBDatasetConfig attribute) (mattertune.configs.DBDatasetConfig attribute) (mattertune.data.db.DBDatasetConfig attribute) StressesPropertyConfig (class in mattertune.configs) (class in mattertune.configs.finetune) (class in mattertune.configs.finetune.properties) (class in mattertune.finetune.properties) strict (mattertune.callbacks.early_stopping.EarlyStoppingConfig attribute) (mattertune.configs.callbacks.early_stopping.EarlyStoppingConfig attribute) (mattertune.configs.callbacks.EarlyStoppingConfig attribute) (mattertune.configs.EarlyStoppingConfig attribute) (mattertune.configs.main.EarlyStoppingConfig attribute) sub_dir (mattertune.configs.loggers.TensorBoardLoggerConfig attribute) (mattertune.configs.TensorBoardLoggerConfig attribute) (mattertune.loggers.TensorBoardLoggerConfig attribute) system (mattertune.backbones.orb.model.ORBBackboneConfig attribute) (mattertune.configs.backbones.orb.model.ORBBackboneConfig attribute) (mattertune.configs.backbones.orb.ORBBackboneConfig attribute) (mattertune.configs.backbones.ORBBackboneConfig attribute) (mattertune.configs.ORBBackboneConfig attribute)

T

T_max (mattertune.configs.CosineAnnealingLRConfig attribute) (mattertune.configs.finetune.CosineAnnealingLRConfig attribute) (mattertune.configs.finetune.lr_scheduler.CosineAnnealingLRConfig attribute) (mattertune.finetune.lr_scheduler.CosineAnnealingLRConfig attribute) task (mattertune.configs.data.matbench.MatbenchDatasetConfig attribute) (mattertune.configs.data.MatbenchDatasetConfig attribute) (mattertune.configs.MatbenchDatasetConfig attribute) (mattertune.data.matbench.MatbenchDatasetConfig attribute) tasks (mattertune.configs.data.json_data.JSONDatasetConfig attribute) (mattertune.configs.data.JSONDatasetConfig attribute) (mattertune.configs.JSONDatasetConfig attribute) (mattertune.data.json_data.JSONDatasetConfig attribute) TensorBoardLoggerConfig (class in mattertune.configs) (class in mattertune.configs.loggers) (class in mattertune.loggers) test_step() (mattertune.finetune.base.FinetuneModuleBase method) threebody_cutoff (mattertune.backbones.m3gnet.model.M3GNetGraphComputerConfig attribute) (mattertune.configs.backbones.m3gnet.M3GNetGraphComputerConfig attribute) (mattertune.configs.backbones.m3gnet.model.M3GNetGraphComputerConfig attribute) (mattertune.configs.backbones.M3GNetGraphComputerConfig attribute) (mattertune.configs.M3GNetGraphComputerConfig attribute) threshold (mattertune.configs.finetune.lr_scheduler.ReduceOnPlateauConfig attribute) (mattertune.configs.finetune.ReduceOnPlateauConfig attribute) (mattertune.configs.ReduceOnPlateauConfig attribute) (mattertune.finetune.lr_scheduler.ReduceOnPlateauConfig attribute) threshold_mode (mattertune.configs.finetune.lr_scheduler.ReduceOnPlateauConfig attribute) (mattertune.configs.finetune.ReduceOnPlateauConfig attribute) (mattertune.configs.ReduceOnPlateauConfig attribute) (mattertune.finetune.lr_scheduler.ReduceOnPlateauConfig attribute) timeout (mattertune.finetune.loader.DataLoaderKwargs attribute) train (mattertune.configs.data.datamodule.ManualSplitDataModuleConfig attribute) (mattertune.configs.data.ManualSplitDataModuleConfig attribute) (mattertune.configs.ManualSplitDataModuleConfig attribute) (mattertune.data.datamodule.DatasetMapping attribute) (mattertune.data.datamodule.ManualSplitDataModuleConfig attribute) train_dataloader() (mattertune.data.datamodule.MatterTuneDataModule method) train_split (mattertune.configs.AutoSplitDataModuleConfig attribute) (mattertune.configs.data.AutoSplitDataModuleConfig attribute) (mattertune.configs.data.datamodule.AutoSplitDataModuleConfig attribute) (mattertune.data.datamodule.AutoSplitDataModuleConfig attribute) train_time_interval (mattertune.callbacks.model_checkpoint.ModelCheckpointConfig attribute) (mattertune.configs.callbacks.model_checkpoint.ModelCheckpointConfig attribute) (mattertune.configs.callbacks.ModelCheckpointConfig attribute) (mattertune.configs.main.ModelCheckpointConfig attribute) (mattertune.configs.ModelCheckpointConfig attribute) trainer (mattertune.configs.main.MatterTunerConfig attribute) (mattertune.configs.MatterTunerConfig attribute) (mattertune.main.MatterTunerConfig attribute) (mattertune.main.TuneOutput attribute) TrainerConfig (class in mattertune.configs) (class in mattertune.configs.main) (class in mattertune.main) training_step() (mattertune.finetune.base.FinetuneModuleBase method) tune() (mattertune.main.MatterTuner method) TuneOutput (class in mattertune.main) type (mattertune.configs.CosineAnnealingLRConfig attribute) (mattertune.configs.CSVLoggerConfig attribute) (mattertune.configs.data.db.DBDatasetConfig attribute) (mattertune.configs.data.DBDatasetConfig attribute) (mattertune.configs.data.json_data.JSONDatasetConfig attribute) (mattertune.configs.data.JSONDatasetConfig attribute) (mattertune.configs.data.matbench.MatbenchDatasetConfig attribute) (mattertune.configs.data.MatbenchDatasetConfig attribute) (mattertune.configs.data.mp.MPDatasetConfig attribute) (mattertune.configs.data.MPDatasetConfig attribute) (mattertune.configs.data.mptraj.MPTrajDatasetConfig attribute) (mattertune.configs.data.MPTrajDatasetConfig attribute) (mattertune.configs.data.omat24.OMAT24DatasetConfig attribute) (mattertune.configs.data.OMAT24DatasetConfig attribute) (mattertune.configs.data.xyz.XYZDatasetConfig attribute) (mattertune.configs.data.XYZDatasetConfig attribute) (mattertune.configs.DBDatasetConfig attribute) (mattertune.configs.EnergyPropertyConfig attribute) (mattertune.configs.ExponentialConfig attribute) (mattertune.configs.finetune.CosineAnnealingLRConfig attribute) (mattertune.configs.finetune.EnergyPropertyConfig attribute) (mattertune.configs.finetune.ExponentialConfig attribute) (mattertune.configs.finetune.ForcesPropertyConfig attribute) (mattertune.configs.finetune.GraphPropertyConfig attribute) (mattertune.configs.finetune.lr_scheduler.CosineAnnealingLRConfig attribute) (mattertune.configs.finetune.lr_scheduler.ExponentialConfig attribute) (mattertune.configs.finetune.lr_scheduler.MultiStepLRConfig attribute) (mattertune.configs.finetune.lr_scheduler.ReduceOnPlateauConfig attribute) (mattertune.configs.finetune.lr_scheduler.StepLRConfig attribute) (mattertune.configs.finetune.MultiStepLRConfig attribute) (mattertune.configs.finetune.properties.EnergyPropertyConfig attribute) (mattertune.configs.finetune.properties.ForcesPropertyConfig attribute) (mattertune.configs.finetune.properties.GraphPropertyConfig attribute) (mattertune.configs.finetune.properties.StressesPropertyConfig attribute) (mattertune.configs.finetune.ReduceOnPlateauConfig attribute) (mattertune.configs.finetune.StepLRConfig attribute) (mattertune.configs.finetune.StressesPropertyConfig attribute) (mattertune.configs.ForcesPropertyConfig attribute) (mattertune.configs.GraphPropertyConfig attribute) (mattertune.configs.JSONDatasetConfig attribute) (mattertune.configs.loggers.CSVLoggerConfig attribute) (mattertune.configs.loggers.TensorBoardLoggerConfig attribute) (mattertune.configs.loggers.WandbLoggerConfig attribute) (mattertune.configs.main.CSVLoggerConfig attribute) (mattertune.configs.MatbenchDatasetConfig attribute) (mattertune.configs.MPDatasetConfig attribute) (mattertune.configs.MPTrajDatasetConfig attribute) (mattertune.configs.MultiStepLRConfig attribute) (mattertune.configs.OMAT24DatasetConfig attribute) (mattertune.configs.ReduceOnPlateauConfig attribute) (mattertune.configs.StepLRConfig attribute) (mattertune.configs.StressesPropertyConfig attribute) (mattertune.configs.TensorBoardLoggerConfig attribute) (mattertune.configs.WandbLoggerConfig attribute) (mattertune.configs.XYZDatasetConfig attribute) (mattertune.data.db.DBDatasetConfig attribute) (mattertune.data.json_data.JSONDatasetConfig attribute) (mattertune.data.matbench.MatbenchDatasetConfig attribute) (mattertune.data.mp.MPDatasetConfig attribute) (mattertune.data.mptraj.MPTrajDatasetConfig attribute) (mattertune.data.omat24.OMAT24DatasetConfig attribute) (mattertune.data.xyz.XYZDatasetConfig attribute) (mattertune.finetune.lr_scheduler.CosineAnnealingLRConfig attribute) (mattertune.finetune.lr_scheduler.ExponentialConfig attribute) (mattertune.finetune.lr_scheduler.MultiStepLRConfig attribute) (mattertune.finetune.lr_scheduler.ReduceOnPlateauConfig attribute) (mattertune.finetune.lr_scheduler.StepLRConfig attribute) (mattertune.finetune.properties.EnergyPropertyConfig attribute) (mattertune.finetune.properties.ForcesPropertyConfig attribute) (mattertune.finetune.properties.GraphPropertyConfig attribute) (mattertune.finetune.properties.StressesPropertyConfig attribute) (mattertune.loggers.CSVLoggerConfig attribute) (mattertune.loggers.TensorBoardLoggerConfig attribute) (mattertune.loggers.WandbLoggerConfig attribute)

V

val_check_interval (mattertune.configs.main.TrainerConfig attribute) (mattertune.configs.TrainerConfig attribute) (mattertune.main.TrainerConfig attribute) val_dataloader() (mattertune.data.datamodule.MatterTuneDataModule method) validation (mattertune.configs.data.datamodule.ManualSplitDataModuleConfig attribute) (mattertune.configs.data.ManualSplitDataModuleConfig attribute) (mattertune.configs.ManualSplitDataModuleConfig attribute) (mattertune.data.datamodule.DatasetMapping attribute) (mattertune.data.datamodule.ManualSplitDataModuleConfig attribute) validation_split (mattertune.configs.AutoSplitDataModuleConfig attribute) (mattertune.configs.data.AutoSplitDataModuleConfig attribute) (mattertune.configs.data.datamodule.AutoSplitDataModuleConfig attribute) (mattertune.data.datamodule.AutoSplitDataModuleConfig attribute) validation_step() (mattertune.finetune.base.FinetuneModuleBase method) verbose (mattertune.callbacks.early_stopping.EarlyStoppingConfig attribute) (mattertune.callbacks.model_checkpoint.ModelCheckpointConfig attribute) (mattertune.configs.callbacks.early_stopping.EarlyStoppingConfig attribute) (mattertune.configs.callbacks.EarlyStoppingConfig attribute) (mattertune.configs.callbacks.model_checkpoint.ModelCheckpointConfig attribute) (mattertune.configs.callbacks.ModelCheckpointConfig attribute) (mattertune.configs.EarlyStoppingConfig attribute) (mattertune.configs.main.EarlyStoppingConfig attribute) (mattertune.configs.main.ModelCheckpointConfig attribute) (mattertune.configs.ModelCheckpointConfig attribute)

version (mattertune.configs.CSVLoggerConfig attribute) (mattertune.configs.loggers.CSVLoggerConfig attribute) (mattertune.configs.loggers.TensorBoardLoggerConfig attribute) (mattertune.configs.loggers.WandbLoggerConfig attribute) (mattertune.configs.main.CSVLoggerConfig attribute) (mattertune.configs.TensorBoardLoggerConfig attribute) (mattertune.configs.WandbLoggerConfig attribute) (mattertune.loggers.CSVLoggerConfig attribute) (mattertune.loggers.TensorBoardLoggerConfig attribute) (mattertune.loggers.WandbLoggerConfig attribute) voigt_6_to_full_3x3_stress_torch() (in module mattertune.backbones.util)

W

WandbLoggerConfig (class in mattertune.configs) (class in mattertune.configs.loggers) (class in mattertune.loggers) weight_decay (mattertune.configs.AdamConfig attribute) (mattertune.configs.AdamWConfig attribute) (mattertune.configs.finetune.AdamConfig attribute) (mattertune.configs.finetune.AdamWConfig attribute) (mattertune.configs.finetune.optimizer.AdamConfig attribute) (mattertune.configs.finetune.optimizer.AdamWConfig attribute) (mattertune.configs.finetune.optimizer.SGDConfig attribute) (mattertune.configs.finetune.SGDConfig attribute) (mattertune.configs.SGDConfig attribute) (mattertune.finetune.optimizer.AdamConfig attribute) (mattertune.finetune.optimizer.AdamWConfig attribute) (mattertune.finetune.optimizer.SGDConfig attribute)

worker_init_fn (mattertune.finetune.loader.DataLoaderKwargs attribute)

X

XYZDataset (class in mattertune.data.xyz) XYZDatasetConfig (class in mattertune.configs) (class in mattertune.configs.data) (class in mattertune.configs.data.xyz) (class in mattertune.data.xyz)